Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CDH13P55290 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
CDH13P55290 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDH13P55290 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH13P55290 PTCHD3P3-201ENST00000403073 906 ntBASIC16.39■□□□□ 0.21
CDH13P55290 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH13P55290 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CDH13P55290 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH13P55290 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH13P55290 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH13P55290 AC139887.3-201ENST00000568585 713 ntBASIC16.39■□□□□ 0.21
CDH13P55290 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH13P55290 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.39■□□□□ 0.21
CDH13P55290 AC008608.2-201ENST00000606089 416 ntBASIC16.39■□□□□ 0.21
CDH13P55290 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH13P55290 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH13P55290 AL139011.1-202ENST00000642063 584 ntBASIC16.39■□□□□ 0.21
CDH13P55290 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH13P55290 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH13P55290 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH13P55290 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDH13P55290 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CDH13P55290 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 AC007950.2-201ENST00000615045 2347 ntBASIC16.38■□□□□ 0.21
CDH13P55290 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH13P55290 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CDH13P55290 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 TSPY19P-201ENST00000418461 509 ntBASIC16.38■□□□□ 0.21
CDH13P55290 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH13P55290 TSPY18P-201ENST00000441642 509 ntBASIC16.38■□□□□ 0.21
CDH13P55290 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH13P55290 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH13P55290 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH13P55290 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH13P55290 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH13P55290 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.38■□□□□ 0.21
CDH13P55290 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
CDH13P55290 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH13P55290 AC004706.3-202ENST00000621574 984 ntBASIC16.38■□□□□ 0.21
CDH13P55290 AL162727.3-201ENST00000635661 2787 ntBASIC16.38■□□□□ 0.21
CDH13P55290 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CDH13P55290 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH13P55290 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH13P55290 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH13P55290 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH13P55290 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH13P55290 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH13P55290 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH13P55290 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH13P55290 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDH13P55290 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.37■□□□□ 0.21
CDH13P55290 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH13P55290 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDH13P55290 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH13P55290 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms