Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH6P55285 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.4■□□□□ 0.38
CDH6P55285 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH6P55285 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CDH6P55285 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH6P55285 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH6P55285 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDH6P55285 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH6P55285 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDH6P55285 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.4■□□□□ 0.38
CDH6P55285 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 AC108751.1-201ENST00000490852 363 ntBASIC17.4■□□□□ 0.38
CDH6P55285 AC087641.1-201ENST00000557561 1021 ntBASIC17.4■□□□□ 0.38
CDH6P55285 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH6P55285 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
CDH6P55285 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.4■□□□□ 0.38
CDH6P55285 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH6P55285 AC116407.3-201ENST00000623905 1129 ntBASIC17.4■□□□□ 0.38
CDH6P55285 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH6P55285 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 AL512652.2-201ENST00000625156 1716 ntBASIC17.4■□□□□ 0.38
CDH6P55285 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH6P55285 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH6P55285 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH6P55285 AC005052.1-201ENST00000625181 2492 ntBASIC17.4■□□□□ 0.38
CDH6P55285 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH6P55285 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDH6P55285 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
CDH6P55285 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH6P55285 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH6P55285 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDH6P55285 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH6P55285 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDH6P55285 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH6P55285 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH6P55285 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH6P55285 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.39■□□□□ 0.37
CDH6P55285 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH6P55285 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH6P55285 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH6P55285 MIR4751-201ENST00000578027 74 ntBASIC17.39■□□□□ 0.37
CDH6P55285 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CDH6P55285 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDH6P55285 AC010654.1-201ENST00000615722 808 ntBASIC17.39■□□□□ 0.37
CDH6P55285 AP001350.2-201ENST00000625104 1094 ntBASIC17.39■□□□□ 0.37
CDH6P55285 HLA-A-201ENST00000376802 1334 ntBASIC17.39■□□□□ 0.37
CDH6P55285 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH6P55285 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CDH6P55285 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH6P55285 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH6P55285 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CDH6P55285 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDH6P55285 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH6P55285 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDH6P55285 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDH6P55285 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH6P55285 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CDH6P55285 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDH6P55285 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms