Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC015967.2-201ENST00000624092 234 ntBASIC18.4■□□□□ 0.54
BRCA2P51587 AC006435.4-201ENST00000625037 234 ntBASIC18.4■□□□□ 0.54
BRCA2P51587 AL356737.1-201ENST00000634391 234 ntBASIC18.4■□□□□ 0.54
BRCA2P51587 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRCA2P51587 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BRCA2P51587 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BRCA2P51587 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRCA2P51587 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.4■□□□□ 0.54
BRCA2P51587 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRCA2P51587 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRCA2P51587 KRT8P12-202ENST00000472924 1397 ntBASIC18.4■□□□□ 0.54
BRCA2P51587 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.4■□□□□ 0.54
BRCA2P51587 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRCA2P51587 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.4■□□□□ 0.54
BRCA2P51587 AL139327.4-201ENST00000612362 153 ntBASIC18.4■□□□□ 0.54
BRCA2P51587 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.4■□□□□ 0.54
BRCA2P51587 KRT18P55-202ENST00000578578 1546 ntBASIC18.4■□□□□ 0.54
BRCA2P51587 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRCA2P51587 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRCA2P51587 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRCA2P51587 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
BRCA2P51587 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BRCA2P51587 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.39■□□□□ 0.54
BRCA2P51587 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
BRCA2P51587 RPL13AP20-201ENST00000459725 609 ntBASIC18.39■□□□□ 0.54
BRCA2P51587 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
BRCA2P51587 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.39■□□□□ 0.54
BRCA2P51587 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.39■□□□□ 0.54
BRCA2P51587 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
BRCA2P51587 TOP3BP1-201ENST00000420768 1380 ntBASIC18.39■□□□□ 0.53
BRCA2P51587 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
BRCA2P51587 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.39■□□□□ 0.53
BRCA2P51587 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.39■□□□□ 0.53
BRCA2P51587 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
BRCA2P51587 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.39■□□□□ 0.53
BRCA2P51587 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCA2P51587 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCA2P51587 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.39■□□□□ 0.53
BRCA2P51587 AC006033.1-201ENST00000440505 426 ntBASIC18.39■□□□□ 0.53
BRCA2P51587 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.39■□□□□ 0.53
BRCA2P51587 AC091167.2-201ENST00000579581 588 ntBASIC18.39■□□□□ 0.53
BRCA2P51587 AC004461.2-201ENST00000629517 803 ntBASIC18.39■□□□□ 0.53
BRCA2P51587 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCA2P51587 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCA2P51587 CROCCP2-202ENST00000412962 2773 ntBASIC18.39■□□□□ 0.53
BRCA2P51587 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.39■□□□□ 0.53
BRCA2P51587 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRCA2P51587 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
BRCA2P51587 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCA2P51587 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.39■□□□□ 0.53
BRCA2P51587 FAM86HP-204ENST00000513466 959 ntBASIC18.39■□□□□ 0.53
BRCA2P51587 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.39■□□□□ 0.53
BRCA2P51587 AC106872.11-201ENST00000605838 421 ntBASIC18.39■□□□□ 0.53
BRCA2P51587 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCA2P51587 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.39■□□□□ 0.53
BRCA2P51587 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCA2P51587 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.38■□□□□ 0.53
BRCA2P51587 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 AC253536.4-201ENST00000440539 267 ntBASIC18.38■□□□□ 0.53
BRCA2P51587 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.38■□□□□ 0.53
BRCA2P51587 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.38■□□□□ 0.53
BRCA2P51587 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.38■□□□□ 0.53
BRCA2P51587 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.38■□□□□ 0.53
BRCA2P51587 AC092978.1-202ENST00000637590 1327 ntBASIC18.38■□□□□ 0.53
BRCA2P51587 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
BRCA2P51587 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.38■□□□□ 0.53
BRCA2P51587 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.38■□□□□ 0.53
BRCA2P51587 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.38■□□□□ 0.53
BRCA2P51587 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.38■□□□□ 0.53
BRCA2P51587 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.38■□□□□ 0.53
BRCA2P51587 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.38■□□□□ 0.53
BRCA2P51587 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.38■□□□□ 0.53
BRCA2P51587 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.38■□□□□ 0.53
BRCA2P51587 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.38■□□□□ 0.53
BRCA2P51587 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCA2P51587 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
BRCA2P51587 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
BRCA2P51587 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.37■□□□□ 0.53
BRCA2P51587 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.37■□□□□ 0.53
BRCA2P51587 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRCA2P51587 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.37■□□□□ 0.53
BRCA2P51587 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
BRCA2P51587 RRP7BP-205ENST00000566851 833 ntBASIC18.37■□□□□ 0.53
BRCA2P51587 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.37■□□□□ 0.53
BRCA2P51587 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.37■□□□□ 0.53
BRCA2P51587 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
BRCA2P51587 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCA2P51587 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.37■□□□□ 0.53
BRCA2P51587 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms