Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SRP9P49458 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.91□□□□□ -0.02
SRP9P49458 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SRP9P49458 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SRP9P49458 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.9□□□□□ -0.02
SRP9P49458 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SRP9P49458 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP9P49458 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.9□□□□□ -0.02
SRP9P49458 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP9P49458 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.9□□□□□ -0.02
SRP9P49458 RBM17P3-201ENST00000417687 1192 ntBASIC14.9□□□□□ -0.02
SRP9P49458 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SRP9P49458 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.9□□□□□ -0.02
SRP9P49458 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP9P49458 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SRP9P49458 KRT126P-201ENST00000549467 1181 ntBASIC14.9□□□□□ -0.02
SRP9P49458 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP9P49458 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 AC019129.2-201ENST00000609837 1235 ntBASIC14.9□□□□□ -0.02
SRP9P49458 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.9□□□□□ -0.02
SRP9P49458 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SRP9P49458 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
SRP9P49458 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP9P49458 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.9□□□□□ -0.02
SRP9P49458 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SRP9P49458 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP9P49458 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP9P49458 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP9P49458 AL353593.2-201ENST00000602529 1483 ntBASIC14.89□□□□□ -0.03
SRP9P49458 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SRP9P49458 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SRP9P49458 AC104640.1-201ENST00000562617 2109 ntBASIC14.89□□□□□ -0.03
SRP9P49458 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
SRP9P49458 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 AC003669.1-201ENST00000334569 611 ntBASIC14.89□□□□□ -0.03
SRP9P49458 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.89□□□□□ -0.03
SRP9P49458 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP9P49458 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.89□□□□□ -0.03
SRP9P49458 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.89□□□□□ -0.03
SRP9P49458 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP9P49458 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.89□□□□□ -0.03
SRP9P49458 AD001527.2-201ENST00000622994 785 ntBASIC14.89□□□□□ -0.03
SRP9P49458 AC073592.5-201ENST00000624854 528 ntBASIC14.89□□□□□ -0.03
SRP9P49458 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP9P49458 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP9P49458 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP9P49458 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
SRP9P49458 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP9P49458 KRT8P10-201ENST00000450021 1447 ntBASIC14.89□□□□□ -0.03
SRP9P49458 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SRP9P49458 AL049757.1-201ENST00000616842 1596 ntBASIC14.89□□□□□ -0.03
SRP9P49458 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SRP9P49458 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SRP9P49458 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP9P49458 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.88□□□□□ -0.03
SRP9P49458 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SRP9P49458 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP9P49458 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SRP9P49458 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms