Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
PCP4P48539 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
PCP4P48539 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.31□□□□□ -0.6
PCP4P48539 AC037459.3-201ENST00000521025 2750 ntBASIC11.31□□□□□ -0.6
PCP4P48539 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 PTBP1P-201ENST00000554374 1601 ntBASIC11.31□□□□□ -0.6
PCP4P48539 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC11.31□□□□□ -0.6
PCP4P48539 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.31□□□□□ -0.6
PCP4P48539 AC022400.8-201ENST00000623453 3599 ntBASIC11.31□□□□□ -0.6
PCP4P48539 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.31□□□□□ -0.6
PCP4P48539 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
PCP4P48539 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
PCP4P48539 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC11.3□□□□□ -0.6
PCP4P48539 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
PCP4P48539 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
PCP4P48539 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.3□□□□□ -0.6
PCP4P48539 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC11.3□□□□□ -0.6
PCP4P48539 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 LOXL2-201ENST00000389131 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
PCP4P48539 AL713866.1-201ENST00000563320 3125 ntBASIC11.3□□□□□ -0.6
PCP4P48539 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC11.3□□□□□ -0.6
PCP4P48539 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.3□□□□□ -0.6
PCP4P48539 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC11.3□□□□□ -0.6
PCP4P48539 AP005117.1-202ENST00000581724 1908 ntBASIC11.3□□□□□ -0.6
PCP4P48539 POLR3F-201ENST00000377603 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 NHSL2-202ENST00000510661 3082 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
PCP4P48539 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC11.3□□□□□ -0.6
PCP4P48539 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
PCP4P48539 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
PCP4P48539 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
PCP4P48539 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PCP4P48539 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
PCP4P48539 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
PCP4P48539 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
PCP4P48539 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC11.29□□□□□ -0.6
PCP4P48539 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.29□□□□□ -0.6
PCP4P48539 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 AC015819.3-201ENST00000624305 2674 ntBASIC11.29□□□□□ -0.6
PCP4P48539 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.29□□□□□ -0.6
PCP4P48539 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC11.29□□□□□ -0.6
PCP4P48539 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC11.29□□□□□ -0.6
PCP4P48539 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
PCP4P48539 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms