Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA4P48058 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GRIA4P48058 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.12■□□□□ 0.33
GRIA4P48058 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA4P48058 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA4P48058 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA4P48058 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA4P48058 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.12■□□□□ 0.33
GRIA4P48058 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA4P48058 FAM58CP-201ENST00000435741 640 ntBASIC17.12■□□□□ 0.33
GRIA4P48058 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.12■□□□□ 0.33
GRIA4P48058 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
GRIA4P48058 AP000344.2-201ENST00000512987 629 ntBASIC17.12■□□□□ 0.33
GRIA4P48058 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.12■□□□□ 0.33
GRIA4P48058 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.12■□□□□ 0.33
GRIA4P48058 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
GRIA4P48058 TUBB8P12-201ENST00000308911 1335 ntBASIC17.12■□□□□ 0.33
GRIA4P48058 TUBB7P-202ENST00000428444 1305 ntBASIC17.12■□□□□ 0.33
GRIA4P48058 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA4P48058 TUBB8P7-204ENST00000567960 1332 ntBASIC17.12■□□□□ 0.33
GRIA4P48058 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GRIA4P48058 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA4P48058 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GRIA4P48058 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA4P48058 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GRIA4P48058 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA4P48058 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA4P48058 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.12■□□□□ 0.33
GRIA4P48058 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
GRIA4P48058 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.11■□□□□ 0.33
GRIA4P48058 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.11■□□□□ 0.33
GRIA4P48058 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GRIA4P48058 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
GRIA4P48058 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.11■□□□□ 0.33
GRIA4P48058 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 SLC25A6P2-201ENST00000497974 877 ntBASIC17.11■□□□□ 0.33
GRIA4P48058 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.11■□□□□ 0.33
GRIA4P48058 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.11■□□□□ 0.33
GRIA4P48058 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.11■□□□□ 0.33
GRIA4P48058 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.11■□□□□ 0.33
GRIA4P48058 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.11■□□□□ 0.33
GRIA4P48058 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
GRIA4P48058 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
GRIA4P48058 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
GRIA4P48058 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GRIA4P48058 AC025580.3-201ENST00000617932 1424 ntBASIC17.11■□□□□ 0.33
GRIA4P48058 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.11■□□□□ 0.33
GRIA4P48058 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GRIA4P48058 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.1■□□□□ 0.33
GRIA4P48058 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GRIA4P48058 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
GRIA4P48058 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.1■□□□□ 0.33
GRIA4P48058 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.1■□□□□ 0.33
GRIA4P48058 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
GRIA4P48058 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
GRIA4P48058 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.1■□□□□ 0.33
GRIA4P48058 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.1■□□□□ 0.33
GRIA4P48058 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.1■□□□□ 0.33
GRIA4P48058 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.1■□□□□ 0.33
GRIA4P48058 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.1■□□□□ 0.33
GRIA4P48058 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GRIA4P48058 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.1■□□□□ 0.33
GRIA4P48058 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.1■□□□□ 0.33
GRIA4P48058 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.1■□□□□ 0.33
GRIA4P48058 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
GRIA4P48058 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIA4P48058 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.1■□□□□ 0.33
GRIA4P48058 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
GRIA4P48058 AC092068.3-201ENST00000587894 2016 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms