Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AL031008.1-201ENST00000619963 541 ntBASIC15.42■□□□□ 0.06
SLC1A3P43003 PGM5P2-202ENST00000637225 1043 ntBASIC15.42■□□□□ 0.06
SLC1A3P43003 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 LINC00895-201ENST00000629028 1637 ntBASIC15.42■□□□□ 0.06
SLC1A3P43003 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
SLC1A3P43003 AL391256.1-201ENST00000443260 1855 ntBASIC15.42■□□□□ 0.06
SLC1A3P43003 AC007950.2-201ENST00000615045 2347 ntBASIC15.42■□□□□ 0.06
SLC1A3P43003 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
SLC1A3P43003 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC1A3P43003 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 AL356488.2-201ENST00000602755 427 ntBASIC15.41■□□□□ 0.06
SLC1A3P43003 AL121894.2-201ENST00000602977 491 ntBASIC15.41■□□□□ 0.06
SLC1A3P43003 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SLC1A3P43003 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC1A3P43003 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC1A3P43003 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
SLC1A3P43003 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC1A3P43003 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
SLC1A3P43003 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SLC1A3P43003 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 AC002310.6-201ENST00000624451 1377 ntBASIC15.4■□□□□ 0.06
SLC1A3P43003 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC1A3P43003 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC1A3P43003 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC1A3P43003 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SLC1A3P43003 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC1A3P43003 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.4■□□□□ 0.06
SLC1A3P43003 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC1A3P43003 AP002469.2-201ENST00000531724 424 ntBASIC15.4■□□□□ 0.06
SLC1A3P43003 AL160237.2-201ENST00000556165 472 ntBASIC15.4■□□□□ 0.06
SLC1A3P43003 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC1A3P43003 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC1A3P43003 AC104692.2-201ENST00000603054 253 ntBASIC15.4■□□□□ 0.06
SLC1A3P43003 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC1A3P43003 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC1A3P43003 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SLC1A3P43003 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms