Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 AC011270.2-201ENST00000624293 2550 ntBASIC16.61■□□□□ 0.25
HMGCLP35914 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HMGCLP35914 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.61■□□□□ 0.25
HMGCLP35914 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.61■□□□□ 0.25
HMGCLP35914 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.61■□□□□ 0.25
HMGCLP35914 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.61■□□□□ 0.25
HMGCLP35914 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HMGCLP35914 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 AC020765.3-201ENST00000613051 740 ntBASIC16.61■□□□□ 0.25
HMGCLP35914 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.61■□□□□ 0.25
HMGCLP35914 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.61■□□□□ 0.25
HMGCLP35914 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.61■□□□□ 0.25
HMGCLP35914 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
HMGCLP35914 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.61■□□□□ 0.25
HMGCLP35914 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMGCLP35914 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HMGCLP35914 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
HMGCLP35914 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.6■□□□□ 0.25
HMGCLP35914 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HMGCLP35914 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.6■□□□□ 0.25
HMGCLP35914 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.6■□□□□ 0.25
HMGCLP35914 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HMGCLP35914 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.6■□□□□ 0.25
HMGCLP35914 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.6■□□□□ 0.25
HMGCLP35914 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HMGCLP35914 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.6■□□□□ 0.25
HMGCLP35914 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.6■□□□□ 0.25
HMGCLP35914 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.6■□□□□ 0.25
HMGCLP35914 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
HMGCLP35914 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
HMGCLP35914 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.6■□□□□ 0.25
HMGCLP35914 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HMGCLP35914 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGCLP35914 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGCLP35914 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.59■□□□□ 0.25
HMGCLP35914 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGCLP35914 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGCLP35914 ME2P1-201ENST00000426028 1970 ntBASIC16.59■□□□□ 0.25
HMGCLP35914 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HMGCLP35914 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HMGCLP35914 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGCLP35914 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGCLP35914 YBX2P1-201ENST00000394192 760 ntBASIC16.59■□□□□ 0.25
HMGCLP35914 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HMGCLP35914 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 AC091812.2-201ENST00000619081 385 ntBASIC16.59■□□□□ 0.25
HMGCLP35914 C20orf181-201ENST00000623918 480 ntBASIC16.59■□□□□ 0.25
HMGCLP35914 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HMGCLP35914 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.59■□□□□ 0.25
HMGCLP35914 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.59■□□□□ 0.25
HMGCLP35914 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.59■□□□□ 0.25
HMGCLP35914 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HMGCLP35914 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HMGCLP35914 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGCLP35914 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCLP35914 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
HMGCLP35914 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGCLP35914 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.58■□□□□ 0.25
HMGCLP35914 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms