Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PCK1P35558 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.66■□□□□ 0.42
PCK1P35558 AL450487.1-201ENST00000426799 995 ntBASIC17.66■□□□□ 0.42
PCK1P35558 KRT18P67-201ENST00000432816 1264 ntBASIC17.66■□□□□ 0.42
PCK1P35558 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.66■□□□□ 0.42
PCK1P35558 FAAHP1-202ENST00000446499 1238 ntBASIC17.66■□□□□ 0.42
PCK1P35558 RPS15P9-201ENST00000494093 319 ntBASIC17.66■□□□□ 0.42
PCK1P35558 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.66■□□□□ 0.42
PCK1P35558 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.66■□□□□ 0.42
PCK1P35558 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.66■□□□□ 0.42
PCK1P35558 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
PCK1P35558 RN7SL510P-201ENST00000581311 263 ntBASIC17.66■□□□□ 0.42
PCK1P35558 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.66■□□□□ 0.42
PCK1P35558 AL139011.1-202ENST00000642063 584 ntBASIC17.66■□□□□ 0.42
PCK1P35558 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.66■□□□□ 0.42
PCK1P35558 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCK1P35558 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PCK1P35558 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCK1P35558 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCK1P35558 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCK1P35558 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCK1P35558 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 DOC2GP-204ENST00000639052 2548 ntBASIC17.65■□□□□ 0.42
PCK1P35558 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.65■□□□□ 0.42
PCK1P35558 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.65■□□□□ 0.42
PCK1P35558 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.65■□□□□ 0.42
PCK1P35558 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCK1P35558 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.65■□□□□ 0.42
PCK1P35558 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.65■□□□□ 0.42
PCK1P35558 HNRNPDP1-201ENST00000439535 754 ntBASIC17.65■□□□□ 0.42
PCK1P35558 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.65■□□□□ 0.42
PCK1P35558 AF186996.4-201ENST00000467186 377 ntBASIC17.65■□□□□ 0.42
PCK1P35558 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.65■□□□□ 0.42
PCK1P35558 GGTLC5P-201ENST00000617623 998 ntBASIC17.65■□□□□ 0.42
PCK1P35558 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
PCK1P35558 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.65■□□□□ 0.42
PCK1P35558 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCK1P35558 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.65■□□□□ 0.42
PCK1P35558 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCK1P35558 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 HLA-A-202ENST00000376806 1854 ntBASIC17.65■□□□□ 0.42
PCK1P35558 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCK1P35558 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCK1P35558 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.65■□□□□ 0.42
PCK1P35558 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCK1P35558 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.64■□□□□ 0.42
PCK1P35558 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCK1P35558 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 AC103702.1-201ENST00000548801 2630 ntBASIC17.64■□□□□ 0.41
PCK1P35558 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
PCK1P35558 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PCK1P35558 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
PCK1P35558 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 RPS2P28-201ENST00000314255 741 ntBASIC17.64■□□□□ 0.41
PCK1P35558 AC004870.1-201ENST00000315132 882 ntBASIC17.64■□□□□ 0.41
PCK1P35558 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.64■□□□□ 0.41
PCK1P35558 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 HLA-J-202ENST00000469281 1241 ntBASIC17.64■□□□□ 0.41
PCK1P35558 SLC25A6P2-201ENST00000497974 877 ntBASIC17.64■□□□□ 0.41
PCK1P35558 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 AC008667.4-201ENST00000607370 168 ntBASIC17.64■□□□□ 0.41
PCK1P35558 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.64■□□□□ 0.41
PCK1P35558 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCK1P35558 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.64■□□□□ 0.41
PCK1P35558 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms