Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
SLC6A4P31645 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A4P31645 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A4P31645 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC6A4P31645 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A4P31645 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.1■□□□□ 0.33
SLC6A4P31645 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC6A4P31645 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC6A4P31645 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A4P31645 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC6A4P31645 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SLC6A4P31645 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A4P31645 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC6A4P31645 KRT18P34-201ENST00000488218 1270 ntBASIC17.1■□□□□ 0.33
SLC6A4P31645 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC6A4P31645 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC6A4P31645 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.1■□□□□ 0.33
SLC6A4P31645 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC6A4P31645 AC093028.1-201ENST00000622998 982 ntBASIC17.1■□□□□ 0.33
SLC6A4P31645 AC008267.7-201ENST00000624570 1194 ntBASIC17.1■□□□□ 0.33
SLC6A4P31645 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC6A4P31645 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC6A4P31645 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 AC006538.1-201ENST00000567905 1585 ntBASIC17.1■□□□□ 0.33
SLC6A4P31645 UBALD1-205ENST00000590891 2641 ntBASIC17.1■□□□□ 0.33
SLC6A4P31645 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC6A4P31645 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC6A4P31645 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SLC6A4P31645 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC6A4P31645 KRT18P32-201ENST00000424695 1287 ntBASIC17.09■□□□□ 0.33
SLC6A4P31645 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC6A4P31645 GPS2P2-201ENST00000430745 888 ntBASIC17.09■□□□□ 0.33
SLC6A4P31645 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC6A4P31645 HLA-J-203ENST00000494367 1087 ntBASIC17.09■□□□□ 0.33
SLC6A4P31645 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC6A4P31645 IGHV3-62-201ENST00000520057 340 ntBASIC17.09■□□□□ 0.33
SLC6A4P31645 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC6A4P31645 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC6A4P31645 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC6A4P31645 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC6A4P31645 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC6A4P31645 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC6A4P31645 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC6A4P31645 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 UXT-AS1-201ENST00000590504 1525 ntBASIC17.09■□□□□ 0.33
SLC6A4P31645 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC6A4P31645 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC6A4P31645 GGT4P-201ENST00000623672 1708 ntBASIC17.09■□□□□ 0.33
SLC6A4P31645 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SLC6A4P31645 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A4P31645 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SLC6A4P31645 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
SLC6A4P31645 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A4P31645 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A4P31645 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A4P31645 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A4P31645 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A4P31645 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A4P31645 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A4P31645 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
SLC6A4P31645 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A4P31645 HLA-A-202ENST00000376806 1854 ntBASIC17.08■□□□□ 0.33
SLC6A4P31645 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms