Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL671710.1-201ENST00000610245 2349 ntBASIC15.89■□□□□ 0.13
PTPN6P29350 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN6P29350 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 AL512652.2-201ENST00000625156 1716 ntBASIC15.89■□□□□ 0.13
PTPN6P29350 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN6P29350 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PTPN6P29350 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PTPN6P29350 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN6P29350 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 PAWRP1-201ENST00000451083 565 ntBASIC15.89■□□□□ 0.13
PTPN6P29350 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.89■□□□□ 0.13
PTPN6P29350 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN6P29350 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.89■□□□□ 0.13
PTPN6P29350 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PTPN6P29350 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.89■□□□□ 0.13
PTPN6P29350 MIR4492-201ENST00000581627 80 ntBASIC15.89■□□□□ 0.13
PTPN6P29350 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PTPN6P29350 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN6P29350 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN6P29350 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN6P29350 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN6P29350 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PTPN6P29350 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN6P29350 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PTPN6P29350 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PTPN6P29350 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PTPN6P29350 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 NCF1C-201ENST00000438382 1427 ntBASIC15.88■□□□□ 0.13
PTPN6P29350 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PTPN6P29350 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN6P29350 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN6P29350 AC079776.4-201ENST00000511039 504 ntBASIC15.88■□□□□ 0.13
PTPN6P29350 OR7E14P-202ENST00000530490 1290 ntBASIC15.88■□□□□ 0.13
PTPN6P29350 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PTPN6P29350 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 MIR7706-201ENST00000613747 67 ntBASIC15.88■□□□□ 0.13
PTPN6P29350 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.88■□□□□ 0.13
PTPN6P29350 FAM215A-202ENST00000632077 792 ntBASIC15.88■□□□□ 0.13
PTPN6P29350 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.88■□□□□ 0.13
PTPN6P29350 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
PTPN6P29350 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN6P29350 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN6P29350 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN6P29350 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN6P29350 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PTPN6P29350 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PTPN6P29350 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PTPN6P29350 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
PTPN6P29350 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PTPN6P29350 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN6P29350 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms