Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.15■□□□□ 0.18
CAPN3P20807 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.15■□□□□ 0.18
CAPN3P20807 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
CAPN3P20807 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CAPN3P20807 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CAPN3P20807 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
CAPN3P20807 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN3P20807 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CAPN3P20807 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN3P20807 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN3P20807 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.14■□□□□ 0.17
CAPN3P20807 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.14■□□□□ 0.17
CAPN3P20807 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN3P20807 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.14■□□□□ 0.17
CAPN3P20807 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CAPN3P20807 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CAPN3P20807 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CAPN3P20807 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 AL020989.1-201ENST00000422979 469 ntBASIC16.14■□□□□ 0.17
CAPN3P20807 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.14■□□□□ 0.17
CAPN3P20807 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN3P20807 AC092865.5-201ENST00000545435 363 ntBASIC16.14■□□□□ 0.17
CAPN3P20807 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.14■□□□□ 0.17
CAPN3P20807 Z69720.1-201ENST00000601483 472 ntBASIC16.14■□□□□ 0.17
CAPN3P20807 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN3P20807 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN3P20807 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN3P20807 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN3P20807 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CAPN3P20807 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.14■□□□□ 0.17
CAPN3P20807 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN3P20807 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CAPN3P20807 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CAPN3P20807 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN3P20807 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CAPN3P20807 AC097637.2-201ENST00000624096 1997 ntBASIC16.13■□□□□ 0.17
CAPN3P20807 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN3P20807 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CAPN3P20807 KRT8P49-201ENST00000604166 1432 ntBASIC16.13■□□□□ 0.17
CAPN3P20807 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN3P20807 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CAPN3P20807 SPDYE21P-201ENST00000413323 827 ntBASIC16.13■□□□□ 0.17
CAPN3P20807 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN3P20807 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN3P20807 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CAPN3P20807 SAPCD2P3-201ENST00000455031 850 ntBASIC16.13■□□□□ 0.17
CAPN3P20807 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CAPN3P20807 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN3P20807 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
CAPN3P20807 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.13■□□□□ 0.17
CAPN3P20807 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN3P20807 BNIP3P18-201ENST00000593976 575 ntBASIC16.13■□□□□ 0.17
CAPN3P20807 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN3P20807 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN3P20807 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CAPN3P20807 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN3P20807 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 IL9RP2-201ENST00000423948 1312 ntBASIC16.13■□□□□ 0.17
CAPN3P20807 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN3P20807 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN3P20807 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN3P20807 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN3P20807 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
CAPN3P20807 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CAPN3P20807 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 AC006277.1-201ENST00000624348 1610 ntBASIC16.12■□□□□ 0.17
CAPN3P20807 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN3P20807 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN3P20807 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms