Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MIR4515-201ENST00000584082 81 ntBASIC17.54■□□□□ 0.4
PDGFRAP16234 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.54■□□□□ 0.4
PDGFRAP16234 AL512652.2-201ENST00000625156 1716 ntBASIC17.54■□□□□ 0.4
PDGFRAP16234 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFRAP16234 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PDGFRAP16234 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFRAP16234 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PDGFRAP16234 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFRAP16234 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFRAP16234 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PDGFRAP16234 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
PDGFRAP16234 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFRAP16234 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFRAP16234 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFRAP16234 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.54■□□□□ 0.4
PDGFRAP16234 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFRAP16234 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFRAP16234 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PDGFRAP16234 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFRAP16234 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFRAP16234 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFRAP16234 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDGFRAP16234 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
PDGFRAP16234 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PDGFRAP16234 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.53■□□□□ 0.4
PDGFRAP16234 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PDGFRAP16234 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.53■□□□□ 0.4
PDGFRAP16234 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFRAP16234 AC096734.2-201ENST00000562054 433 ntBASIC17.53■□□□□ 0.4
PDGFRAP16234 AC018845.2-201ENST00000568326 409 ntBASIC17.53■□□□□ 0.4
PDGFRAP16234 AC010507.1-201ENST00000633895 436 ntBASIC17.53■□□□□ 0.4
PDGFRAP16234 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.53■□□□□ 0.4
PDGFRAP16234 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFRAP16234 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
PDGFRAP16234 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PDGFRAP16234 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFRAP16234 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.53■□□□□ 0.4
PDGFRAP16234 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFRAP16234 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDGFRAP16234 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.53■□□□□ 0.4
PDGFRAP16234 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.52■□□□□ 0.4
PDGFRAP16234 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PDGFRAP16234 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.52■□□□□ 0.4
PDGFRAP16234 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.52■□□□□ 0.4
PDGFRAP16234 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.52■□□□□ 0.4
PDGFRAP16234 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PDGFRAP16234 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PDGFRAP16234 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.52■□□□□ 0.4
PDGFRAP16234 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PDGFRAP16234 AC023274.1-201ENST00000418278 595 ntBASIC17.52■□□□□ 0.4
PDGFRAP16234 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.52■□□□□ 0.4
PDGFRAP16234 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.52■□□□□ 0.4
PDGFRAP16234 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
PDGFRAP16234 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PDGFRAP16234 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.52■□□□□ 0.4
PDGFRAP16234 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
PDGFRAP16234 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.52■□□□□ 0.4
PDGFRAP16234 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.52■□□□□ 0.4
PDGFRAP16234 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.52■□□□□ 0.4
PDGFRAP16234 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.52■□□□□ 0.4
PDGFRAP16234 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDGFRAP16234 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
PDGFRAP16234 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDGFRAP16234 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDGFRAP16234 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDGFRAP16234 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PDGFRAP16234 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDGFRAP16234 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.52■□□□□ 0.39
PDGFRAP16234 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PDGFRAP16234 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDGFRAP16234 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDGFRAP16234 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDGFRAP16234 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PDGFRAP16234 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
PDGFRAP16234 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDGFRAP16234 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PDGFRAP16234 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDGFRAP16234 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms