Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.07■□□□□ 0.8
COL11A2P13942 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.07■□□□□ 0.8
COL11A2P13942 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.07■□□□□ 0.8
COL11A2P13942 RARRES2P5-201ENST00000564013 466 ntBASIC20.07■□□□□ 0.8
COL11A2P13942 MIR6787-201ENST00000616675 61 ntBASIC20.07■□□□□ 0.8
COL11A2P13942 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL11A2P13942 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.07■□□□□ 0.8
COL11A2P13942 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL11A2P13942 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL11A2P13942 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.07■□□□□ 0.8
COL11A2P13942 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A2P13942 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
COL11A2P13942 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A2P13942 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A2P13942 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A2P13942 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COL11A2P13942 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A2P13942 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.06■□□□□ 0.8
COL11A2P13942 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.06■□□□□ 0.8
COL11A2P13942 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL11A2P13942 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
COL11A2P13942 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COL11A2P13942 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A2P13942 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COL11A2P13942 AL162726.2-201ENST00000438986 1017 ntBASIC20.06■□□□□ 0.8
COL11A2P13942 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.06■□□□□ 0.8
COL11A2P13942 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.06■□□□□ 0.8
COL11A2P13942 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A2P13942 AL033527.5-201ENST00000641382 801 ntBASIC20.06■□□□□ 0.8
COL11A2P13942 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A2P13942 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.06■□□□□ 0.8
COL11A2P13942 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COL11A2P13942 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.06■□□□□ 0.8
COL11A2P13942 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.06■□□□□ 0.8
COL11A2P13942 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A2P13942 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL11A2P13942 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A2P13942 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL11A2P13942 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.06■□□□□ 0.8
COL11A2P13942 AC134043.2-201ENST00000624206 2238 ntBASIC20.05■□□□□ 0.8
COL11A2P13942 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.05■□□□□ 0.8
COL11A2P13942 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A2P13942 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.05■□□□□ 0.8
COL11A2P13942 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A2P13942 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.05■□□□□ 0.8
COL11A2P13942 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A2P13942 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
COL11A2P13942 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.05■□□□□ 0.8
COL11A2P13942 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
COL11A2P13942 GPR182-203ENST00000622922 591 ntBASIC20.05■□□□□ 0.8
COL11A2P13942 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COL11A2P13942 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A2P13942 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.05■□□□□ 0.8
COL11A2P13942 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.05■□□□□ 0.8
COL11A2P13942 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A2P13942 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL11A2P13942 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COL11A2P13942 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.05■□□□□ 0.8
COL11A2P13942 AL139010.1-201ENST00000454878 894 ntBASIC20.05■□□□□ 0.8
COL11A2P13942 AC108725.1-201ENST00000495472 409 ntBASIC20.05■□□□□ 0.8
COL11A2P13942 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.05■□□□□ 0.8
COL11A2P13942 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
COL11A2P13942 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL11A2P13942 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.05■□□□□ 0.8
COL11A2P13942 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.05■□□□□ 0.8
COL11A2P13942 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL11A2P13942 AC020765.3-201ENST00000613051 740 ntBASIC20.05■□□□□ 0.8
COL11A2P13942 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
COL11A2P13942 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.04■□□□□ 0.8
COL11A2P13942 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COL11A2P13942 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COL11A2P13942 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.04■□□□□ 0.8
COL11A2P13942 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.04■□□□□ 0.8
COL11A2P13942 AC004945.1-201ENST00000416738 983 ntBASIC20.04■□□□□ 0.8
COL11A2P13942 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.04■□□□□ 0.8
COL11A2P13942 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.04■□□□□ 0.8
COL11A2P13942 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.04■□□□□ 0.8
COL11A2P13942 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COL11A2P13942 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.04■□□□□ 0.8
COL11A2P13942 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
COL11A2P13942 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.04■□□□□ 0.8
COL11A2P13942 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COL11A2P13942 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL11A2P13942 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms