Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.07□□□□□ -0.32
CD28P10747 AP001350.2-201ENST00000625104 1094 ntBASIC13.07□□□□□ -0.32
CD28P10747 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.07□□□□□ -0.32
CD28P10747 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CD28P10747 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CD28P10747 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CD28P10747 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.07□□□□□ -0.32
CD28P10747 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.07□□□□□ -0.32
CD28P10747 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.07□□□□□ -0.32
CD28P10747 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CD28P10747 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.06□□□□□ -0.32
CD28P10747 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.06□□□□□ -0.32
CD28P10747 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 WASH6P-202ENST00000359512 1437 ntBASIC13.06□□□□□ -0.32
CD28P10747 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 GPS2P2-201ENST00000430745 888 ntBASIC13.06□□□□□ -0.32
CD28P10747 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.06□□□□□ -0.32
CD28P10747 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.06□□□□□ -0.32
CD28P10747 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 AC093214.1-201ENST00000511688 1107 ntBASIC13.06□□□□□ -0.32
CD28P10747 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CD28P10747 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.06□□□□□ -0.32
CD28P10747 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 MPDU1-223ENST00000582151 728 ntBASIC13.06□□□□□ -0.32
CD28P10747 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.06□□□□□ -0.32
CD28P10747 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.06□□□□□ -0.32
CD28P10747 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CD28P10747 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CD28P10747 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.06□□□□□ -0.32
CD28P10747 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 TUBB3P1-201ENST00000405796 1332 ntBASIC13.06□□□□□ -0.32
CD28P10747 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.06□□□□□ -0.32
CD28P10747 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
CD28P10747 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.06□□□□□ -0.32
CD28P10747 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD28P10747 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CD28P10747 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.05□□□□□ -0.32
CD28P10747 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.05□□□□□ -0.32
CD28P10747 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.05□□□□□ -0.32
CD28P10747 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.05□□□□□ -0.32
CD28P10747 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.05□□□□□ -0.32
CD28P10747 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CD28P10747 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CD28P10747 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.05□□□□□ -0.32
CD28P10747 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.05□□□□□ -0.32
CD28P10747 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.05□□□□□ -0.32
CD28P10747 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.05□□□□□ -0.32
CD28P10747 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms