Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.73■□□□□ 0.59
HOXC6P09630 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.73■□□□□ 0.59
HOXC6P09630 AC006277.1-201ENST00000624348 1610 ntBASIC18.73■□□□□ 0.59
HOXC6P09630 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.73■□□□□ 0.59
HOXC6P09630 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.73■□□□□ 0.59
HOXC6P09630 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.73■□□□□ 0.59
HOXC6P09630 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC6P09630 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.72■□□□□ 0.59
HOXC6P09630 CROCCP2-202ENST00000412962 2773 ntBASIC18.72■□□□□ 0.59
HOXC6P09630 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC6P09630 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
HOXC6P09630 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC6P09630 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC6P09630 RNA5SP410-201ENST00000516285 106 ntBASIC18.72■□□□□ 0.59
HOXC6P09630 IGHV3-71-201ENST00000523324 359 ntBASIC18.72■□□□□ 0.59
HOXC6P09630 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.72■□□□□ 0.59
HOXC6P09630 AC104794.3-201ENST00000566840 1248 ntBASIC18.72■□□□□ 0.59
HOXC6P09630 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.72■□□□□ 0.59
HOXC6P09630 IGHV3-72-202ENST00000621503 303 ntBASIC18.72■□□□□ 0.59
HOXC6P09630 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.72■□□□□ 0.59
HOXC6P09630 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC6P09630 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC6P09630 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC6P09630 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC6P09630 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HOXC6P09630 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXC6P09630 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXC6P09630 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HOXC6P09630 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXC6P09630 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.71■□□□□ 0.59
HOXC6P09630 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
HOXC6P09630 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 GNAQP1-201ENST00000444815 1067 ntBASIC18.71■□□□□ 0.59
HOXC6P09630 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.71■□□□□ 0.59
HOXC6P09630 AC093004.1-201ENST00000508850 424 ntBASIC18.71■□□□□ 0.59
HOXC6P09630 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXC6P09630 AC010336.2-201ENST00000564226 506 ntBASIC18.71■□□□□ 0.59
HOXC6P09630 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HOXC6P09630 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXC6P09630 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HOXC6P09630 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
HOXC6P09630 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXC6P09630 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HOXC6P09630 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HOXC6P09630 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HOXC6P09630 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXC6P09630 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
HOXC6P09630 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HOXC6P09630 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.71■□□□□ 0.58
HOXC6P09630 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.71■□□□□ 0.58
HOXC6P09630 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HOXC6P09630 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HOXC6P09630 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC6P09630 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC6P09630 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC6P09630 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HOXC6P09630 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HOXC6P09630 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXC6P09630 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXC6P09630 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXC6P09630 INE1-201ENST00000456273 945 ntBASIC18.7■□□□□ 0.58
HOXC6P09630 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.7■□□□□ 0.58
HOXC6P09630 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXC6P09630 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.7■□□□□ 0.58
HOXC6P09630 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXC6P09630 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXC6P09630 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXC6P09630 LINC02012-201ENST00000608206 1725 ntBASIC18.7■□□□□ 0.58
HOXC6P09630 AC004790.1-201ENST00000612686 536 ntBASIC18.7■□□□□ 0.58
HOXC6P09630 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HOXC6P09630 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC6P09630 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms