Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
MMP2P08253 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.77■□□□□ 0.28
MMP2P08253 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.77■□□□□ 0.28
MMP2P08253 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP2P08253 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP2P08253 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.77■□□□□ 0.28
MMP2P08253 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.77■□□□□ 0.28
MMP2P08253 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.77■□□□□ 0.28
MMP2P08253 AC002347.1-201ENST00000569543 541 ntBASIC16.77■□□□□ 0.28
MMP2P08253 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.77■□□□□ 0.28
MMP2P08253 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP2P08253 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.77■□□□□ 0.28
MMP2P08253 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
MMP2P08253 AC006449.5-201ENST00000610658 2098 ntBASIC16.77■□□□□ 0.27
MMP2P08253 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MMP2P08253 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MMP2P08253 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MMP2P08253 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP2P08253 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.77■□□□□ 0.27
MMP2P08253 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MMP2P08253 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP2P08253 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MMP2P08253 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
MMP2P08253 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.76■□□□□ 0.27
MMP2P08253 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
MMP2P08253 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MMP2P08253 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.76■□□□□ 0.27
MMP2P08253 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MMP2P08253 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.76■□□□□ 0.27
MMP2P08253 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MMP2P08253 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.76■□□□□ 0.27
MMP2P08253 AC020765.3-201ENST00000613051 740 ntBASIC16.76■□□□□ 0.27
MMP2P08253 AC091812.2-201ENST00000619081 385 ntBASIC16.76■□□□□ 0.27
MMP2P08253 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP2P08253 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP2P08253 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP2P08253 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MMP2P08253 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP2P08253 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP2P08253 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
MMP2P08253 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.76■□□□□ 0.27
MMP2P08253 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP2P08253 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP2P08253 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.75■□□□□ 0.27
MMP2P08253 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.75■□□□□ 0.27
MMP2P08253 AC016027.1-202ENST00000607927 1699 ntBASIC16.75■□□□□ 0.27
MMP2P08253 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
MMP2P08253 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 PCDH8P1-201ENST00000428983 2773 ntBASIC16.75■□□□□ 0.27
MMP2P08253 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP2P08253 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.75■□□□□ 0.27
MMP2P08253 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.75■□□□□ 0.27
MMP2P08253 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
MMP2P08253 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.75■□□□□ 0.27
MMP2P08253 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.75■□□□□ 0.27
MMP2P08253 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.75■□□□□ 0.27
MMP2P08253 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.75■□□□□ 0.27
MMP2P08253 AC092902.6-201ENST00000641783 218 ntBASIC16.75■□□□□ 0.27
MMP2P08253 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP2P08253 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.75■□□□□ 0.27
MMP2P08253 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP2P08253 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms