Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM2P07951 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM2P07951 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.1■□□□□ 0.65
TPM2P07951 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM2P07951 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC19.1■□□□□ 0.65
TPM2P07951 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPM2P07951 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 AC073347.1-201ENST00000421633 2643 ntBASIC19.09■□□□□ 0.65
TPM2P07951 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TPM2P07951 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TPM2P07951 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM2P07951 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TPM2P07951 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TPM2P07951 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TPM2P07951 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TPM2P07951 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM2P07951 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM2P07951 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 AL645929.1-201ENST00000420084 975 ntBASIC19.09■□□□□ 0.65
TPM2P07951 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.09■□□□□ 0.65
TPM2P07951 AC122714.2-201ENST00000502787 707 ntBASIC19.09■□□□□ 0.65
TPM2P07951 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TPM2P07951 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM2P07951 AC011840.4-201ENST00000578471 627 ntBASIC19.09■□□□□ 0.65
TPM2P07951 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM2P07951 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.09■□□□□ 0.65
TPM2P07951 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.09■□□□□ 0.65
TPM2P07951 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TPM2P07951 AC006011.2-201ENST00000621313 1158 ntBASIC19.09■□□□□ 0.65
TPM2P07951 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TPM2P07951 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM2P07951 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM2P07951 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.09■□□□□ 0.65
TPM2P07951 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TPM2P07951 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TPM2P07951 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.09■□□□□ 0.65
TPM2P07951 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM2P07951 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TPM2P07951 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM2P07951 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM2P07951 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM2P07951 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.08■□□□□ 0.65
TPM2P07951 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.08■□□□□ 0.65
TPM2P07951 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM2P07951 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM2P07951 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.08■□□□□ 0.65
TPM2P07951 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TPM2P07951 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TPM2P07951 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.08■□□□□ 0.64
TPM2P07951 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.08■□□□□ 0.64
TPM2P07951 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM2P07951 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.08■□□□□ 0.64
TPM2P07951 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM2P07951 LINC01023-201ENST00000606054 436 ntBASIC19.08■□□□□ 0.64
TPM2P07951 AC019129.2-201ENST00000609837 1235 ntBASIC19.08■□□□□ 0.64
TPM2P07951 AC124864.1-201ENST00000623408 392 ntBASIC19.08■□□□□ 0.64
TPM2P07951 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM2P07951 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM2P07951 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM2P07951 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM2P07951 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM2P07951 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
TPM2P07951 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM2P07951 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM2P07951 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC19.07■□□□□ 0.64
TPM2P07951 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM2P07951 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM2P07951 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM2P07951 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM2P07951 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TPM2P07951 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms