Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.82■□□□□ 0.6
TPM3P06753 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TPM3P06753 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
TPM3P06753 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TPM3P06753 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM3P06753 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM3P06753 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.81■□□□□ 0.6
TPM3P06753 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM3P06753 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM3P06753 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TPM3P06753 KLF4P1-201ENST00000412782 1185 ntBASIC18.81■□□□□ 0.6
TPM3P06753 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.81■□□□□ 0.6
TPM3P06753 AL137013.1-201ENST00000432946 1228 ntBASIC18.81■□□□□ 0.6
TPM3P06753 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.81■□□□□ 0.6
TPM3P06753 AC112907.2-201ENST00000448639 330 ntBASIC18.81■□□□□ 0.6
TPM3P06753 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.81■□□□□ 0.6
TPM3P06753 AC073912.3-201ENST00000624414 853 ntBASIC18.81■□□□□ 0.6
TPM3P06753 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.81■□□□□ 0.6
TPM3P06753 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
TPM3P06753 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TPM3P06753 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TPM3P06753 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TPM3P06753 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM3P06753 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TPM3P06753 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM3P06753 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TPM3P06753 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM3P06753 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.8■□□□□ 0.6
TPM3P06753 AC087499.1-201ENST00000418141 1075 ntBASIC18.8■□□□□ 0.6
TPM3P06753 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.8■□□□□ 0.6
TPM3P06753 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TPM3P06753 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.8■□□□□ 0.6
TPM3P06753 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM3P06753 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM3P06753 AC011840.4-201ENST00000578471 627 ntBASIC18.8■□□□□ 0.6
TPM3P06753 AL353801.3-201ENST00000609898 542 ntBASIC18.8■□□□□ 0.6
TPM3P06753 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM3P06753 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM3P06753 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM3P06753 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.8■□□□□ 0.6
TPM3P06753 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TPM3P06753 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.8■□□□□ 0.6
TPM3P06753 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.79■□□□□ 0.6
TPM3P06753 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.79■□□□□ 0.6
TPM3P06753 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TPM3P06753 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TPM3P06753 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TPM3P06753 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 RNF152P1-201ENST00000397754 604 ntBASIC18.79■□□□□ 0.6
TPM3P06753 AC113347.1-201ENST00000413321 391 ntBASIC18.79■□□□□ 0.6
TPM3P06753 TSPY5P-201ENST00000426936 936 ntBASIC18.79■□□□□ 0.6
TPM3P06753 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.79■□□□□ 0.6
TPM3P06753 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.79■□□□□ 0.6
TPM3P06753 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.79■□□□□ 0.6
TPM3P06753 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.79■□□□□ 0.6
TPM3P06753 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TPM3P06753 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TPM3P06753 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TPM3P06753 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.79■□□□□ 0.6
TPM3P06753 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms