Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.09□□□□□ -0.15
CD74P04233 SLC25A3P1-201ENST00000443844 931 ntBASIC14.09□□□□□ -0.15
CD74P04233 VENTXP5-201ENST00000523979 775 ntBASIC14.09□□□□□ -0.15
CD74P04233 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.09□□□□□ -0.15
CD74P04233 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.09□□□□□ -0.15
CD74P04233 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.09□□□□□ -0.15
CD74P04233 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.09□□□□□ -0.15
CD74P04233 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CD74P04233 AL031731.1-201ENST00000642131 2094 ntBASIC14.09□□□□□ -0.15
CD74P04233 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CD74P04233 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.09□□□□□ -0.15
CD74P04233 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.09□□□□□ -0.15
CD74P04233 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD74P04233 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.08□□□□□ -0.15
CD74P04233 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.08□□□□□ -0.15
CD74P04233 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD74P04233 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.08□□□□□ -0.15
CD74P04233 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.08□□□□□ -0.16
CD74P04233 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CD74P04233 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.08□□□□□ -0.16
CD74P04233 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.08□□□□□ -0.16
CD74P04233 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CD74P04233 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
CD74P04233 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 AC009533.2-201ENST00000543664 586 ntBASIC14.08□□□□□ -0.16
CD74P04233 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CD74P04233 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CD74P04233 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CD74P04233 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.08□□□□□ -0.16
CD74P04233 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.08□□□□□ -0.16
CD74P04233 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.08□□□□□ -0.16
CD74P04233 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.08□□□□□ -0.16
CD74P04233 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.08□□□□□ -0.16
CD74P04233 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.08□□□□□ -0.16
CD74P04233 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CD74P04233 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD74P04233 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CD74P04233 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CD74P04233 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.07□□□□□ -0.16
CD74P04233 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.07□□□□□ -0.16
CD74P04233 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 AC069224.1-201ENST00000566372 1715 ntBASIC14.07□□□□□ -0.16
CD74P04233 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.07□□□□□ -0.16
CD74P04233 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.07□□□□□ -0.16
CD74P04233 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CD74P04233 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CD74P04233 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.07□□□□□ -0.16
CD74P04233 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.07□□□□□ -0.16
CD74P04233 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.07□□□□□ -0.16
CD74P04233 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
CD74P04233 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.07□□□□□ -0.16
CD74P04233 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.07□□□□□ -0.16
CD74P04233 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CD74P04233 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 AL592071.1-201ENST00000611956 408 ntBASIC14.07□□□□□ -0.16
CD74P04233 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.07□□□□□ -0.16
CD74P04233 REXO1L8P-201ENST00000604378 1897 ntBASIC14.07□□□□□ -0.16
CD74P04233 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD74P04233 AC016027.1-202ENST00000607927 1699 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms