Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NKX2-2O95096 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 AL591424.1-201ENST00000442569 1213 ntBASIC15.4■□□□□ 0.06
NKX2-2O95096 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.4■□□□□ 0.06
NKX2-2O95096 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.4■□□□□ 0.06
NKX2-2O95096 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.4■□□□□ 0.06
NKX2-2O95096 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.4■□□□□ 0.06
NKX2-2O95096 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.4■□□□□ 0.06
NKX2-2O95096 AC027601.4-201ENST00000611259 610 ntBASIC15.4■□□□□ 0.06
NKX2-2O95096 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.4■□□□□ 0.06
NKX2-2O95096 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.4■□□□□ 0.06
NKX2-2O95096 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NKX2-2O95096 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NKX2-2O95096 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NKX2-2O95096 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.4■□□□□ 0.06
NKX2-2O95096 AC025580.3-201ENST00000617932 1424 ntBASIC15.4■□□□□ 0.06
NKX2-2O95096 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.4■□□□□ 0.06
NKX2-2O95096 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.4■□□□□ 0.06
NKX2-2O95096 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
NKX2-2O95096 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NKX2-2O95096 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NKX2-2O95096 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.4■□□□□ 0.06
NKX2-2O95096 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.39■□□□□ 0.05
NKX2-2O95096 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.39■□□□□ 0.05
NKX2-2O95096 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.39■□□□□ 0.05
NKX2-2O95096 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.39■□□□□ 0.05
NKX2-2O95096 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.39■□□□□ 0.05
NKX2-2O95096 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.39■□□□□ 0.05
NKX2-2O95096 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NKX2-2O95096 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.39■□□□□ 0.05
NKX2-2O95096 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.39■□□□□ 0.05
NKX2-2O95096 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.39■□□□□ 0.05
NKX2-2O95096 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.39■□□□□ 0.05
NKX2-2O95096 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.39■□□□□ 0.05
NKX2-2O95096 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.39■□□□□ 0.05
NKX2-2O95096 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.39■□□□□ 0.05
NKX2-2O95096 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
NKX2-2O95096 AC109635.5-201ENST00000533593 962 ntBASIC15.39■□□□□ 0.05
NKX2-2O95096 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NKX2-2O95096 KRT19P2-202ENST00000557173 1012 ntBASIC15.39■□□□□ 0.05
NKX2-2O95096 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
NKX2-2O95096 AC140113.2-201ENST00000604370 208 ntBASIC15.39■□□□□ 0.05
NKX2-2O95096 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.39■□□□□ 0.05
NKX2-2O95096 FAM197Y3-203ENST00000618346 717 ntBASIC15.39■□□□□ 0.05
NKX2-2O95096 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
NKX2-2O95096 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
NKX2-2O95096 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.39■□□□□ 0.05
NKX2-2O95096 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NKX2-2O95096 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.38■□□□□ 0.05
NKX2-2O95096 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 AC005052.1-201ENST00000625181 2492 ntBASIC15.38■□□□□ 0.05
NKX2-2O95096 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NKX2-2O95096 CYP2T1P-202ENST00000641596 2535 ntBASIC15.38■□□□□ 0.05
NKX2-2O95096 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NKX2-2O95096 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NKX2-2O95096 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms