Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC43A1O75387 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC43A1O75387 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC43A1O75387 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC43A1O75387 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC43A1O75387 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC43A1O75387 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC43A1O75387 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC43A1O75387 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC43A1O75387 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC43A1O75387 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC43A1O75387 NFIC-211ENST00000641145 8399 ntBASIC15.23■□□□□ 0.03
SLC43A1O75387 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC43A1O75387 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC43A1O75387 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SLC43A1O75387 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC43A1O75387 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC43A1O75387 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC43A1O75387 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC43A1O75387 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC43A1O75387 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC43A1O75387 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC43A1O75387 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC43A1O75387 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC43A1O75387 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC43A1O75387 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC43A1O75387 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC43A1O75387 AP002469.2-201ENST00000531724 424 ntBASIC15.22■□□□□ 0.03
SLC43A1O75387 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC43A1O75387 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC43A1O75387 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC43A1O75387 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
SLC43A1O75387 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
SLC43A1O75387 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC43A1O75387 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SLC43A1O75387 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC43A1O75387 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC43A1O75387 RNF216P1-203ENST00000404404 2427 ntBASIC15.22■□□□□ 0.03
SLC43A1O75387 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC43A1O75387 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC43A1O75387 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
SLC43A1O75387 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SLC43A1O75387 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
SLC43A1O75387 AL590787.1-201ENST00000568856 1315 ntBASIC15.21■□□□□ 0.03
SLC43A1O75387 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SLC43A1O75387 AL136379.1-201ENST00000623471 2642 ntBASIC15.21■□□□□ 0.03
SLC43A1O75387 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
SLC43A1O75387 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC43A1O75387 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC43A1O75387 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC43A1O75387 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC43A1O75387 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC43A1O75387 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.21■□□□□ 0.03
SLC43A1O75387 AC018712.1-201ENST00000455767 687 ntBASIC15.21■□□□□ 0.03
SLC43A1O75387 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SLC43A1O75387 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC43A1O75387 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC43A1O75387 AC124947.2-201ENST00000547118 1133 ntBASIC15.21■□□□□ 0.03
SLC43A1O75387 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC43A1O75387 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SLC43A1O75387 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC43A1O75387 AC104692.2-201ENST00000603054 253 ntBASIC15.21■□□□□ 0.03
SLC43A1O75387 AL773604.1-201ENST00000617417 272 ntBASIC15.21■□□□□ 0.03
SLC43A1O75387 MIR1199-201ENST00000621445 119 ntBASIC15.21■□□□□ 0.03
SLC43A1O75387 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.21■□□□□ 0.03
SLC43A1O75387 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC43A1O75387 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SLC43A1O75387 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms