Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.7■□□□□ 0.1
HCN1O60741 AC006504.4-201ENST00000592118 1568 ntBASIC15.7■□□□□ 0.1
HCN1O60741 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.7■□□□□ 0.1
HCN1O60741 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.7■□□□□ 0.1
HCN1O60741 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.69■□□□□ 0.1
HCN1O60741 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 AC097637.2-201ENST00000624096 1997 ntBASIC15.69■□□□□ 0.1
HCN1O60741 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.69■□□□□ 0.1
HCN1O60741 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.69■□□□□ 0.1
HCN1O60741 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.69■□□□□ 0.1
HCN1O60741 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HCN1O60741 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.69■□□□□ 0.1
HCN1O60741 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 BX842568.4-201ENST00000421222 227 ntBASIC15.69■□□□□ 0.1
HCN1O60741 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
HCN1O60741 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.69■□□□□ 0.1
HCN1O60741 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HCN1O60741 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.69■□□□□ 0.1
HCN1O60741 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.69■□□□□ 0.1
HCN1O60741 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.69■□□□□ 0.1
HCN1O60741 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.69■□□□□ 0.1
HCN1O60741 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.69■□□□□ 0.1
HCN1O60741 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
HCN1O60741 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HCN1O60741 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCN1O60741 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HCN1O60741 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HCN1O60741 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HCN1O60741 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.68■□□□□ 0.1
HCN1O60741 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.68■□□□□ 0.1
HCN1O60741 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.68■□□□□ 0.1
HCN1O60741 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.68■□□□□ 0.1
HCN1O60741 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 EGFEM1P-202ENST00000431685 1563 ntBASIC15.68■□□□□ 0.1
HCN1O60741 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HCN1O60741 GPR89P-201ENST00000407924 1495 ntBASIC15.68■□□□□ 0.1
HCN1O60741 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HCN1O60741 PGAM5P1-201ENST00000518923 814 ntBASIC15.68■□□□□ 0.1
HCN1O60741 AC092865.5-201ENST00000545435 363 ntBASIC15.68■□□□□ 0.1
HCN1O60741 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.68■□□□□ 0.1
HCN1O60741 AC040169.1-201ENST00000565382 521 ntBASIC15.68■□□□□ 0.1
HCN1O60741 AC008667.4-201ENST00000607370 168 ntBASIC15.68■□□□□ 0.1
HCN1O60741 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.68■□□□□ 0.1
HCN1O60741 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.68■□□□□ 0.1
HCN1O60741 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
HCN1O60741 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCN1O60741 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HCN1O60741 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.67■□□□□ 0.1
HCN1O60741 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.67■□□□□ 0.1
HCN1O60741 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.67■□□□□ 0.1
HCN1O60741 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HCN1O60741 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCN1O60741 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HCN1O60741 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.67■□□□□ 0.1
HCN1O60741 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms