Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.98■□□□□ 0.15
LCMT2O60294 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LCMT2O60294 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.98■□□□□ 0.15
LCMT2O60294 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.98■□□□□ 0.15
LCMT2O60294 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 AL031731.1-201ENST00000642131 2094 ntBASIC15.98■□□□□ 0.15
LCMT2O60294 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
LCMT2O60294 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.97■□□□□ 0.15
LCMT2O60294 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.97■□□□□ 0.15
LCMT2O60294 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.97■□□□□ 0.15
LCMT2O60294 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.97■□□□□ 0.15
LCMT2O60294 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.97■□□□□ 0.15
LCMT2O60294 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LCMT2O60294 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.97■□□□□ 0.15
LCMT2O60294 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.97■□□□□ 0.15
LCMT2O60294 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.97■□□□□ 0.15
LCMT2O60294 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.97■□□□□ 0.15
LCMT2O60294 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.97■□□□□ 0.15
LCMT2O60294 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.97■□□□□ 0.15
LCMT2O60294 AL031055.1-201ENST00000606362 631 ntBASIC15.97■□□□□ 0.15
LCMT2O60294 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.97■□□□□ 0.15
LCMT2O60294 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.97■□□□□ 0.15
LCMT2O60294 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.97■□□□□ 0.15
LCMT2O60294 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.97■□□□□ 0.15
LCMT2O60294 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LCMT2O60294 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LCMT2O60294 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCMT2O60294 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
LCMT2O60294 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCMT2O60294 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.96■□□□□ 0.15
LCMT2O60294 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.96■□□□□ 0.15
LCMT2O60294 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.96■□□□□ 0.15
LCMT2O60294 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LCMT2O60294 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCMT2O60294 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LCMT2O60294 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LCMT2O60294 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LCMT2O60294 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCMT2O60294 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCMT2O60294 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.96■□□□□ 0.15
LCMT2O60294 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.96■□□□□ 0.15
LCMT2O60294 AC004832.2-201ENST00000426397 482 ntBASIC15.96■□□□□ 0.15
LCMT2O60294 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.96■□□□□ 0.15
LCMT2O60294 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.96■□□□□ 0.15
LCMT2O60294 AC002347.1-201ENST00000569543 541 ntBASIC15.96■□□□□ 0.15
LCMT2O60294 AL009183.1-201ENST00000603760 355 ntBASIC15.96■□□□□ 0.15
LCMT2O60294 AC068137.2-201ENST00000605408 478 ntBASIC15.96■□□□□ 0.15
LCMT2O60294 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
LCMT2O60294 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LCMT2O60294 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCMT2O60294 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCMT2O60294 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.96■□□□□ 0.15
LCMT2O60294 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCMT2O60294 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCMT2O60294 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LCMT2O60294 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCMT2O60294 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.96■□□□□ 0.15
LCMT2O60294 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.96■□□□□ 0.14
LCMT2O60294 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LCMT2O60294 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
LCMT2O60294 ALOX12P2-203ENST00000570921 1945 ntBASIC15.96■□□□□ 0.14
LCMT2O60294 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.96■□□□□ 0.14
LCMT2O60294 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 AL139384.1-201ENST00000612143 3047 ntBASIC15.95■□□□□ 0.14
LCMT2O60294 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.95■□□□□ 0.14
LCMT2O60294 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.95■□□□□ 0.14
LCMT2O60294 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.95■□□□□ 0.14
LCMT2O60294 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LCMT2O60294 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.95■□□□□ 0.14
LCMT2O60294 GGT4P-201ENST00000623672 1708 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms