Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF13O43567 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF13O43567 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF13O43567 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF13O43567 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RNF13O43567 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF13O43567 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF13O43567 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF13O43567 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF13O43567 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RNF13O43567 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RNF13O43567 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF13O43567 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.27■□□□□ 0.04
RNF13O43567 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF13O43567 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 AP002414.1-201ENST00000391405 1147 ntBASIC15.27■□□□□ 0.04
RNF13O43567 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF13O43567 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF13O43567 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.27■□□□□ 0.04
RNF13O43567 IFNL4P1-201ENST00000607083 540 ntBASIC15.27■□□□□ 0.04
RNF13O43567 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF13O43567 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RNF13O43567 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
RNF13O43567 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.27■□□□□ 0.03
RNF13O43567 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF13O43567 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RNF13O43567 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF13O43567 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF13O43567 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RNF13O43567 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF13O43567 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
RNF13O43567 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
RNF13O43567 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RNF13O43567 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF13O43567 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF13O43567 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RNF13O43567 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 AKR1C7P-201ENST00000305623 895 ntBASIC15.26■□□□□ 0.03
RNF13O43567 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF13O43567 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF13O43567 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF13O43567 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF13O43567 AF238378.1-201ENST00000526806 358 ntBASIC15.26■□□□□ 0.03
RNF13O43567 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF13O43567 TERC-201ENST00000602385 541 ntBASIC15.26■□□□□ 0.03
RNF13O43567 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF13O43567 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RNF13O43567 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF13O43567 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
RNF13O43567 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.26■□□□□ 0.03
RNF13O43567 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms