Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CEP290O15078 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CEP290O15078 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CEP290O15078 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CEP290O15078 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CEP290O15078 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CEP290O15078 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.83■□□□□ 0.44
CEP290O15078 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CEP290O15078 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.82■□□□□ 0.44
CEP290O15078 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CEP290O15078 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.82■□□□□ 0.44
CEP290O15078 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.82■□□□□ 0.44
CEP290O15078 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 TIMM17BP1-201ENST00000545713 516 ntBASIC17.82■□□□□ 0.44
CEP290O15078 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.82■□□□□ 0.44
CEP290O15078 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.82■□□□□ 0.44
CEP290O15078 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.82■□□□□ 0.44
CEP290O15078 RHOXF1P1-202ENST00000635473 501 ntBASIC17.82■□□□□ 0.44
CEP290O15078 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.82■□□□□ 0.44
CEP290O15078 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.82■□□□□ 0.44
CEP290O15078 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.82■□□□□ 0.44
CEP290O15078 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.82■□□□□ 0.44
CEP290O15078 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CEP290O15078 HIST2H2BC-201ENST00000498492 580 ntBASIC17.82■□□□□ 0.44
CEP290O15078 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.82■□□□□ 0.44
CEP290O15078 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 MIR6069-201ENST00000620069 79 ntBASIC17.82■□□□□ 0.44
CEP290O15078 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
CEP290O15078 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CEP290O15078 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CEP290O15078 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.82■□□□□ 0.44
CEP290O15078 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.82■□□□□ 0.44
CEP290O15078 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CEP290O15078 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CEP290O15078 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.81■□□□□ 0.44
CEP290O15078 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CEP290O15078 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 BX284668.4-201ENST00000453917 508 ntBASIC17.81■□□□□ 0.44
CEP290O15078 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.81■□□□□ 0.44
CEP290O15078 AC036164.1-201ENST00000570544 333 ntBASIC17.81■□□□□ 0.44
CEP290O15078 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.81■□□□□ 0.44
CEP290O15078 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
CEP290O15078 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.81■□□□□ 0.44
CEP290O15078 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CEP290O15078 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 AL671710.1-201ENST00000610245 2349 ntBASIC17.81■□□□□ 0.44
CEP290O15078 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.81■□□□□ 0.44
CEP290O15078 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CEP290O15078 KRT90P-201ENST00000549264 1064 ntBASIC17.81■□□□□ 0.44
CEP290O15078 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.81■□□□□ 0.44
CEP290O15078 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.81■□□□□ 0.44
CEP290O15078 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.81■□□□□ 0.44
CEP290O15078 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.81■□□□□ 0.44
CEP290O15078 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEP290O15078 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.81■□□□□ 0.44
CEP290O15078 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.8■□□□□ 0.44
CEP290O15078 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CEP290O15078 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.8■□□□□ 0.44
CEP290O15078 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CEP290O15078 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.8■□□□□ 0.44
CEP290O15078 FNTAP2-201ENST00000430308 634 ntBASIC17.8■□□□□ 0.44
CEP290O15078 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms