Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.84■□□□□ 0.45
O00370 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.84■□□□□ 0.45
O00370 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.84■□□□□ 0.45
O00370 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.84■□□□□ 0.45
O00370 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
O00370 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.83■□□□□ 0.45
O00370 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
O00370 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
O00370 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
O00370 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
O00370 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
O00370 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.83■□□□□ 0.45
O00370 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.83■□□□□ 0.45
O00370 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
O00370 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
O00370 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
O00370 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
O00370 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
O00370 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.83■□□□□ 0.44
O00370 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
O00370 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.83■□□□□ 0.44
O00370 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.83■□□□□ 0.44
O00370 RNA5SP416-201ENST00000516838 111 ntBASIC17.83■□□□□ 0.44
O00370 KRT18P58-201ENST00000527480 1120 ntBASIC17.83■□□□□ 0.44
O00370 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.83■□□□□ 0.44
O00370 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.83■□□□□ 0.44
O00370 AC087641.1-201ENST00000557561 1021 ntBASIC17.83■□□□□ 0.44
O00370 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.83■□□□□ 0.44
O00370 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
O00370 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
O00370 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.83■□□□□ 0.44
O00370 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
O00370 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
O00370 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.83■□□□□ 0.44
O00370 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
O00370 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
O00370 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
O00370 AC008894.3-201ENST00000624324 3103 ntBASIC17.82■□□□□ 0.44
O00370 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.82■□□□□ 0.44
O00370 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
O00370 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.82■□□□□ 0.44
O00370 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.82■□□□□ 0.44
O00370 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.82■□□□□ 0.44
O00370 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.82■□□□□ 0.44
O00370 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.82■□□□□ 0.44
O00370 AL139011.1-202ENST00000642063 584 ntBASIC17.82■□□□□ 0.44
O00370 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.82■□□□□ 0.44
O00370 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
O00370 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.82■□□□□ 0.44
O00370 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
O00370 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.82■□□□□ 0.44
O00370 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 AC012569.1-201ENST00000591191 1524 ntBASIC17.82■□□□□ 0.44
O00370 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
O00370 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
O00370 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
O00370 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
O00370 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
O00370 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 AL671710.1-201ENST00000610245 2349 ntBASIC17.81■□□□□ 0.44
O00370 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
O00370 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
O00370 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.81■□□□□ 0.44
O00370 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.81■□□□□ 0.44
O00370 HMGA1P7-201ENST00000406908 502 ntBASIC17.81■□□□□ 0.44
O00370 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
O00370 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.81■□□□□ 0.44
O00370 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.81■□□□□ 0.44
O00370 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.81■□□□□ 0.44
O00370 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
O00370 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.81■□□□□ 0.44
O00370 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms