Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 SNX18-202ENST00000343017 3140 ntBASIC11.8□□□□□ -0.52
LINC01546A6NGU7 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 AC013726.1-201ENST00000563747 2285 ntBASIC11.8□□□□□ -0.52
LINC01546A6NGU7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LINC01546A6NGU7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 TOP3BP1-201ENST00000420768 1380 ntBASIC11.79□□□□□ -0.52
LINC01546A6NGU7 AC008677.1-201ENST00000519230 1561 ntBASIC11.79□□□□□ -0.52
LINC01546A6NGU7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 AC232323.1-201ENST00000540724 2099 ntBASIC11.79□□□□□ -0.52
LINC01546A6NGU7 REXO1L5P-201ENST00000622260 2098 ntBASIC11.79□□□□□ -0.52
LINC01546A6NGU7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 AC106881.1-201ENST00000605849 3329 ntBASIC11.79□□□□□ -0.52
LINC01546A6NGU7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 FAM8A6P-201ENST00000407496 1135 ntBASIC11.79□□□□□ -0.52
LINC01546A6NGU7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 MIR4492-201ENST00000581627 80 ntBASIC11.79□□□□□ -0.52
LINC01546A6NGU7 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.79□□□□□ -0.52
LINC01546A6NGU7 AL390719.2-201ENST00000606993 987 ntBASIC11.79□□□□□ -0.52
LINC01546A6NGU7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC01546A6NGU7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 AL592424.1-201ENST00000563624 1536 ntBASIC11.78□□□□□ -0.52
LINC01546A6NGU7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms