Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AL671710.1-201ENST00000610245 2349 ntBASIC22.35■■□□□ 1.17
SBNO1A3KN83 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SBNO1A3KN83 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
SBNO1A3KN83 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SBNO1A3KN83 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SBNO1A3KN83 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 PC-204ENST00000524491 1714 ntTSL 2 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SBNO1A3KN83 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 AC093724.1-201ENST00000448659 1027 ntBASIC22.35■■□□□ 1.17
SBNO1A3KN83 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 WFDC1-204ENST00000613603 549 ntBASIC22.35■■□□□ 1.17
SBNO1A3KN83 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SBNO1A3KN83 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SBNO1A3KN83 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SBNO1A3KN83 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SBNO1A3KN83 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SBNO1A3KN83 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC22.35■■□□□ 1.17
SBNO1A3KN83 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 ANKRD19P-201ENST00000338192 862 ntBASIC22.34■■□□□ 1.17
SBNO1A3KN83 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 AC024267.1-201ENST00000582320 895 ntBASIC22.34■■□□□ 1.17
SBNO1A3KN83 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 MIR6775-201ENST00000617557 69 ntBASIC22.34■■□□□ 1.17
SBNO1A3KN83 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SBNO1A3KN83 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC22.34■■□□□ 1.17
SBNO1A3KN83 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SBNO1A3KN83 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
SBNO1A3KN83 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.33■■□□□ 1.17
SBNO1A3KN83 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SBNO1A3KN83 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SBNO1A3KN83 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SBNO1A3KN83 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SBNO1A3KN83 FAM86MP-201ENST00000340703 885 ntBASIC22.33■■□□□ 1.17
SBNO1A3KN83 MPV17-208ENST00000405076 603 ntTSL 5 BASIC22.33■■□□□ 1.17
SBNO1A3KN83 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC22.33■■□□□ 1.17
SBNO1A3KN83 RHOA-206ENST00000454011 889 ntTSL 2 BASIC22.33■■□□□ 1.17
SBNO1A3KN83 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC22.33■■□□□ 1.17
SBNO1A3KN83 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC22.33■■□□□ 1.17
SBNO1A3KN83 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC22.33■■□□□ 1.17
SBNO1A3KN83 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC22.33■■□□□ 1.17
SBNO1A3KN83 AC026979.3-201ENST00000607315 403 ntBASIC22.33■■□□□ 1.17
SBNO1A3KN83 AL109936.8-201ENST00000641772 604 ntBASIC22.33■■□□□ 1.17
SBNO1A3KN83 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SBNO1A3KN83 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SBNO1A3KN83 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
SBNO1A3KN83 AC067852.2-201ENST00000590513 2313 ntBASIC22.33■■□□□ 1.16
SBNO1A3KN83 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC22.33■■□□□ 1.16
SBNO1A3KN83 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SBNO1A3KN83 REXO1L6P-201ENST00000603433 1515 ntBASIC22.33■■□□□ 1.16
SBNO1A3KN83 KRT8P39-201ENST00000396270 1433 ntBASIC22.33■■□□□ 1.16
SBNO1A3KN83 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
SBNO1A3KN83 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC22.32■■□□□ 1.16
SBNO1A3KN83 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC22.32■■□□□ 1.16
SBNO1A3KN83 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms