Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 SIGLEC30P-201ENST00000455569 941 ntBASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 AC011467.2-201ENST00000598425 242 ntBASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 TERC-201ENST00000602385 541 ntBASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 AC124864.1-201ENST00000623408 392 ntBASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 SSR4P1-203ENST00000599569 2260 ntBASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 AC006486.2-201ENST00000624246 2199 ntBASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 KRT8P39-201ENST00000396270 1433 ntBASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 AC243591.1-201ENST00000452967 1364 ntBASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 KRT18P38-201ENST00000449496 1282 ntBASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 PMPCAP1-201ENST00000508114 1576 ntBASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV3S1A0A5B6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 LINC01144-201ENST00000626198 1710 ntBASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 AC004817.3-201ENST00000602957 2129 ntBASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 AC011840.4-201ENST00000578471 627 ntBASIC15.65■□□□□ 0.1
TCRBV3S1A0A5B6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms