Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC24.83■■□□□ 1.56
CDC42BPBQ9Y5S2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC24.83■■□□□ 1.56
CDC42BPBQ9Y5S2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.56
CDC42BPBQ9Y5S2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 CROCCP4-201ENST00000457096 498 ntBASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 TMEM261P1-201ENST00000604899 340 ntBASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 AL158212.4-201ENST00000624062 1286 ntBASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CDC42BPBQ9Y5S2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 BNIP3P42-201ENST00000454982 569 ntBASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 MIR4525-201ENST00000580000 75 ntBASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 BNIP3P29-201ENST00000598302 571 ntBASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 AC011447.5-201ENST00000616168 564 ntBASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 MIR6069-201ENST00000620069 79 ntBASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 MIR6799-201ENST00000620297 69 ntBASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CDC42BPBQ9Y5S2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC24.8■■□□□ 1.56
CDC42BPBQ9Y5S2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 MIR8072-201ENST00000614241 80 ntBASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC24.79■■□□□ 1.56
CDC42BPBQ9Y5S2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms