Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SOX15-203ENST00000570788 1093 ntBASIC12.71□□□□□ -0.37
TRAPPC1Q9Y5R8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.71□□□□□ -0.37
TRAPPC1Q9Y5R8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAPPC1Q9Y5R8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAPPC1Q9Y5R8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
TRAPPC1Q9Y5R8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAPPC1Q9Y5R8 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAPPC1Q9Y5R8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAPPC1Q9Y5R8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAPPC1Q9Y5R8 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAPPC1Q9Y5R8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAPPC1Q9Y5R8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 HLA-J-202ENST00000469281 1241 ntBASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 MDK-213ENST00000617138 635 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 SSR4P1-203ENST00000599569 2260 ntBASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAPPC1Q9Y5R8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 AC006449.6-201ENST00000612330 2296 ntBASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 GGT4P-201ENST00000623672 1708 ntBASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 AC026396.1-201ENST00000419388 421 ntBASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms