Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB7Q9Y5E2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB7Q9Y5E2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB7Q9Y5E2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDHB7Q9Y5E2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB7Q9Y5E2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB7Q9Y5E2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 CETN4P-206ENST00000642099 2168 ntBASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 AL589739.1-201ENST00000607720 493 ntBASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB7Q9Y5E2 KRT8P39-201ENST00000396270 1433 ntBASIC17.89■□□□□ 0.46
PCDHB7Q9Y5E2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
PCDHB7Q9Y5E2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.89■□□□□ 0.46
PCDHB7Q9Y5E2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 GK-202ENST00000378941 458 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 RNA5SP410-201ENST00000516285 106 ntBASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 RN7SL828P-201ENST00000607615 303 ntBASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB7Q9Y5E2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB7Q9Y5E2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms