Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
NINLQ9Y2I6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 BASP1P1-201ENST00000430708 665 ntBASIC22.7■■□□□ 1.22
NINLQ9Y2I6 AC002472.2-201ENST00000442739 958 ntBASIC22.7■■□□□ 1.22
NINLQ9Y2I6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 AC093214.1-201ENST00000511688 1107 ntBASIC22.7■■□□□ 1.22
NINLQ9Y2I6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 GOLGA2P9-201ENST00000596977 1937 ntBASIC22.7■■□□□ 1.22
NINLQ9Y2I6 FO538757.1-201ENST00000623083 1397 ntBASIC22.7■■□□□ 1.22
NINLQ9Y2I6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NINLQ9Y2I6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 LTB4R2-202ENST00000528054 3092 ntBASIC22.69■■□□□ 1.22
NINLQ9Y2I6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 MIR4453-201ENST00000584019 89 ntBASIC22.69■■□□□ 1.22
NINLQ9Y2I6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 AP001094.4-201ENST00000579008 2176 ntBASIC22.69■■□□□ 1.22
NINLQ9Y2I6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
NINLQ9Y2I6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 AL035456.1-201ENST00000456064 1369 ntBASIC22.68■■□□□ 1.22
NINLQ9Y2I6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 AL353705.2-201ENST00000428243 662 ntBASIC22.68■■□□□ 1.22
NINLQ9Y2I6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 GRAMD4P3-201ENST00000621665 1669 ntBASIC22.68■■□□□ 1.22
NINLQ9Y2I6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC22.68■■□□□ 1.22
NINLQ9Y2I6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 SPDYE12P-201ENST00000618416 771 ntBASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms