Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHA4Q9UN74 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 YBX2P1-201ENST00000394192 760 ntBASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 AC002056.1-201ENST00000395613 760 ntBASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 AC112191.1-201ENST00000523689 701 ntBASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 MTDHP5-201ENST00000598980 586 ntBASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 AC091812.2-201ENST00000619081 385 ntBASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 AC099398.1-201ENST00000567919 2776 ntBASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 ALOX12P2-203ENST00000570921 1945 ntBASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHA4Q9UN74 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 AC099522.2-201ENST00000607001 744 ntBASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHA4Q9UN74 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms