Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 AC009093.7-201ENST00000623853 1223 ntBASIC17.63■□□□□ 0.41
CDH9Q9ULB4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH9Q9ULB4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 KRT18P32-201ENST00000424695 1287 ntBASIC17.62■□□□□ 0.41
CDH9Q9ULB4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 HLA-J-203ENST00000494367 1087 ntBASIC17.62■□□□□ 0.41
CDH9Q9ULB4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 AC084121.4-201ENST00000641598 221 ntBASIC17.62■□□□□ 0.41
CDH9Q9ULB4 AF228730.8-201ENST00000642140 221 ntBASIC17.62■□□□□ 0.41
CDH9Q9ULB4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 UXT-AS1-201ENST00000590504 1525 ntBASIC17.62■□□□□ 0.41
CDH9Q9ULB4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH9Q9ULB4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 AC012313.1-201ENST00000593393 3059 ntBASIC17.61■□□□□ 0.41
CDH9Q9ULB4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 AL139400.1-201ENST00000366220 510 ntBASIC17.61■□□□□ 0.41
CDH9Q9ULB4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH9Q9ULB4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms