Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PNMA3Q9UL41 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 AC007541.1-201ENST00000570282 1469 ntBASIC19.16■□□□□ 0.66
PNMA3Q9UL41 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 AC098614.1-201ENST00000368528 745 ntBASIC19.16■□□□□ 0.66
PNMA3Q9UL41 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 AC098859.1-201ENST00000502915 1238 ntBASIC19.16■□□□□ 0.66
PNMA3Q9UL41 AC009407.1-201ENST00000568958 598 ntBASIC19.16■□□□□ 0.66
PNMA3Q9UL41 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 AL844908.2-201ENST00000609461 460 ntBASIC19.16■□□□□ 0.66
PNMA3Q9UL41 AC008738.7-201ENST00000609744 511 ntBASIC19.16■□□□□ 0.66
PNMA3Q9UL41 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 AC073439.1-201ENST00000624121 1774 ntBASIC19.16■□□□□ 0.66
PNMA3Q9UL41 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.16■□□□□ 0.66
PNMA3Q9UL41 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 AC106820.2-201ENST00000563775 3264 ntBASIC19.15■□□□□ 0.66
PNMA3Q9UL41 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 AC108860.2-201ENST00000562760 2183 ntBASIC19.15■□□□□ 0.66
PNMA3Q9UL41 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 AC139713.2-201ENST00000641328 2723 ntBASIC19.15■□□□□ 0.66
PNMA3Q9UL41 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PNMA3Q9UL41 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
PNMA3Q9UL41 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PNMA3Q9UL41 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.14■□□□□ 0.66
PNMA3Q9UL41 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 RPL37AP1-201ENST00000412502 279 ntBASIC19.14■□□□□ 0.65
PNMA3Q9UL41 ATP5G2P4-201ENST00000442175 420 ntBASIC19.14■□□□□ 0.65
PNMA3Q9UL41 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 AC105021.1-202ENST00000570572 669 ntBASIC19.14■□□□□ 0.65
PNMA3Q9UL41 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PNMA3Q9UL41 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms