Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 AC124947.2-201ENST00000547118 1133 ntBASIC16.78■□□□□ 0.28
MBD1Q9UIS9 AL138918.1-201ENST00000568306 659 ntBASIC16.78■□□□□ 0.28
MBD1Q9UIS9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 AC016027.1-202ENST00000607927 1699 ntBASIC16.78■□□□□ 0.28
MBD1Q9UIS9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
MBD1Q9UIS9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD1Q9UIS9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MBD1Q9UIS9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MBD1Q9UIS9 AC105020.1-201ENST00000435356 2205 ntBASIC16.77■□□□□ 0.27
MBD1Q9UIS9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.77■□□□□ 0.27
MBD1Q9UIS9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
MBD1Q9UIS9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.77■□□□□ 0.27
MBD1Q9UIS9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MBD1Q9UIS9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MBD1Q9UIS9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MBD1Q9UIS9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MBD1Q9UIS9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 MRPS18AP1-201ENST00000414458 589 ntBASIC16.76■□□□□ 0.27
MBD1Q9UIS9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 AC004890.2-204ENST00000481968 304 ntBASIC16.76■□□□□ 0.27
MBD1Q9UIS9 SERBP1P5-201ENST00000510079 1181 ntBASIC16.76■□□□□ 0.27
MBD1Q9UIS9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 AC091167.2-201ENST00000579581 588 ntBASIC16.76■□□□□ 0.27
MBD1Q9UIS9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 AC106886.4-201ENST00000623557 2502 ntBASIC16.76■□□□□ 0.27
MBD1Q9UIS9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 TOP3BP1-201ENST00000420768 1380 ntBASIC16.76■□□□□ 0.27
MBD1Q9UIS9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD1Q9UIS9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.75■□□□□ 0.27
MBD1Q9UIS9 CRB3P1-201ENST00000449338 276 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms