Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.35■□□□□ 0.05
LRFN1Q9P244 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.35■□□□□ 0.05
LRFN1Q9P244 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 SPCS2P4-201ENST00000436160 681 ntBASIC15.35■□□□□ 0.05
LRFN1Q9P244 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 AC109322.1-201ENST00000524499 1264 ntBASIC15.35■□□□□ 0.05
LRFN1Q9P244 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 AC141586.5-201ENST00000624546 2050 ntBASIC15.35■□□□□ 0.05
LRFN1Q9P244 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRFN1Q9P244 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.35■□□□□ 0.05
LRFN1Q9P244 AL023806.1-201ENST00000603994 1649 ntBASIC15.35■□□□□ 0.05
LRFN1Q9P244 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 UXT-AS1-201ENST00000590504 1525 ntBASIC15.34■□□□□ 0.05
LRFN1Q9P244 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 AC069335.1-201ENST00000489972 472 ntBASIC15.34■□□□□ 0.05
LRFN1Q9P244 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 MIR4492-201ENST00000581627 80 ntBASIC15.34■□□□□ 0.05
LRFN1Q9P244 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LRFN1Q9P244 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRFN1Q9P244 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRFN1Q9P244 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LRFN1Q9P244 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LRFN1Q9P244 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LRFN1Q9P244 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRFN1Q9P244 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.33■□□□□ 0.05
LRFN1Q9P244 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.33■□□□□ 0.05
LRFN1Q9P244 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LRFN1Q9P244 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 KRT8P23-201ENST00000560090 1207 ntBASIC15.33■□□□□ 0.04
LRFN1Q9P244 AC021097.1-201ENST00000607902 574 ntBASIC15.33■□□□□ 0.04
LRFN1Q9P244 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms