Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.79■□□□□ 0.6
COL20A1Q9P218 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL20A1Q9P218 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 GPAA1P2-202ENST00000606848 1787 ntBASIC18.78■□□□□ 0.6
COL20A1Q9P218 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 AL158211.3-201ENST00000607385 239 ntBASIC18.78■□□□□ 0.6
COL20A1Q9P218 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.78■□□□□ 0.6
COL20A1Q9P218 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL20A1Q9P218 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL20A1Q9P218 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL20A1Q9P218 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL20A1Q9P218 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL20A1Q9P218 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL20A1Q9P218 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 HLA-H-201ENST00000383620 1096 ntBASIC18.77■□□□□ 0.6
COL20A1Q9P218 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL20A1Q9P218 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 AC069120.2-201ENST00000524091 540 ntBASIC18.77■□□□□ 0.6
COL20A1Q9P218 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 BANF1P1-201ENST00000553684 263 ntBASIC18.77■□□□□ 0.6
COL20A1Q9P218 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL20A1Q9P218 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL20A1Q9P218 AC003101.2-201ENST00000612557 442 ntBASIC18.77■□□□□ 0.6
COL20A1Q9P218 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL20A1Q9P218 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL20A1Q9P218 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
COL20A1Q9P218 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL20A1Q9P218 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL20A1Q9P218 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL20A1Q9P218 AC006538.1-201ENST00000567905 1585 ntBASIC18.76■□□□□ 0.59
COL20A1Q9P218 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
COL20A1Q9P218 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL20A1Q9P218 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL20A1Q9P218 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL20A1Q9P218 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL20A1Q9P218 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.76■□□□□ 0.59
COL20A1Q9P218 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL20A1Q9P218 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL20A1Q9P218 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL20A1Q9P218 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL20A1Q9P218 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL20A1Q9P218 FAM220BP-201ENST00000377689 816 ntBASIC18.76■□□□□ 0.59
COL20A1Q9P218 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
COL20A1Q9P218 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.76■□□□□ 0.59
COL20A1Q9P218 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.76■□□□□ 0.59
COL20A1Q9P218 AC093724.1-201ENST00000448659 1027 ntBASIC18.76■□□□□ 0.59
COL20A1Q9P218 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL20A1Q9P218 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.76■□□□□ 0.59
COL20A1Q9P218 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.76■□□□□ 0.59
COL20A1Q9P218 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.76■□□□□ 0.59
COL20A1Q9P218 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.76■□□□□ 0.59
COL20A1Q9P218 AC007967.4-201ENST00000614700 386 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms