Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 AC016027.1-202ENST00000607927 1699 ntBASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HMG20BQ9P0W2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 FAM58DP-201ENST00000428076 619 ntBASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 AC023141.5-201ENST00000458585 616 ntBASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HMG20BQ9P0W2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 AL645728.1-201ENST00000366221 2101 ntBASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 HLA-J-203ENST00000494367 1087 ntBASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 AC109322.1-201ENST00000524499 1264 ntBASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 AC093028.1-201ENST00000622998 982 ntBASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20BQ9P0W2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 AC005237.2-201ENST00000434368 219 ntBASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 AC009093.7-201ENST00000623853 1223 ntBASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 RNF216P1-203ENST00000404404 2427 ntBASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms