Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SLC52A1Q9NWF4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 AL139010.1-201ENST00000454878 894 ntBASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC23.62■■□□□ 1.37
SLC52A1Q9NWF4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 AC007389.4-201ENST00000454674 793 ntBASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 MIR4259-201ENST00000584466 101 ntBASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SLC52A1Q9NWF4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 AP002490.2-201ENST00000524791 560 ntBASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 AC092068.3-201ENST00000587894 2016 ntBASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 AL391256.1-201ENST00000443260 1855 ntBASIC23.6■■□□□ 1.37
SLC52A1Q9NWF4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 TMEM14DP-201ENST00000422205 345 ntBASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC52A1Q9NWF4 WFDC1-204ENST00000613603 549 ntBASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms