Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NKX6-2Q9C056 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.61□□□□□ -0.23
NKX6-2Q9C056 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 WWOX-216ENST00000569818 525 ntBASIC13.61□□□□□ -0.23
NKX6-2Q9C056 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-2Q9C056 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 AC142086.2-201ENST00000569753 217 ntBASIC13.6□□□□□ -0.23
NKX6-2Q9C056 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 AC112497.1-201ENST00000624824 639 ntBASIC13.6□□□□□ -0.23
NKX6-2Q9C056 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 AC041040.2-201ENST00000622926 2899 ntBASIC13.6□□□□□ -0.23
NKX6-2Q9C056 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 AL596087.1-201ENST00000400979 1969 ntBASIC13.6□□□□□ -0.23
NKX6-2Q9C056 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NKX6-2Q9C056 AC009949.1-201ENST00000623048 1830 ntBASIC13.6□□□□□ -0.23
NKX6-2Q9C056 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms