Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CRNKL1Q9BZJ0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CRNKL1Q9BZJ0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CRNKL1Q9BZJ0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.76
CRNKL1Q9BZJ0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CRNKL1Q9BZJ0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CRNKL1Q9BZJ0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CRNKL1Q9BZJ0 AC105020.1-201ENST00000435356 2205 ntBASIC19.83■□□□□ 0.76
CRNKL1Q9BZJ0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CRNKL1Q9BZJ0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.83■□□□□ 0.76
CRNKL1Q9BZJ0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 AP001059.3-201ENST00000619053 235 ntBASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 AL512652.2-201ENST00000625156 1716 ntBASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.82■□□□□ 0.76
CRNKL1Q9BZJ0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 AC105233.2-201ENST00000523697 349 ntBASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 AF228730.5-201ENST00000530288 346 ntBASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 AL512356.2-201ENST00000546955 174 ntBASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
CRNKL1Q9BZJ0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CRNKL1Q9BZJ0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.8■□□□□ 0.76
CRNKL1Q9BZJ0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CRNKL1Q9BZJ0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRNKL1Q9BZJ0 AL603756.1-201ENST00000606511 2163 ntBASIC19.8■□□□□ 0.76
CRNKL1Q9BZJ0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.8■□□□□ 0.76
CRNKL1Q9BZJ0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.8■□□□□ 0.76
CRNKL1Q9BZJ0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CRNKL1Q9BZJ0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CRNKL1Q9BZJ0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CRNKL1Q9BZJ0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.8■□□□□ 0.76
CRNKL1Q9BZJ0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms