Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 AC006453.2-201ENST00000636531 1196 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 FP325313.1-201ENST00000638228 703 ntBASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 SMN1-202ENST00000380707 1536 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 SMN2-203ENST00000380743 1536 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 MTCO1P9-201ENST00000505577 1534 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC018737.2-201ENST00000624478 1512 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 NIFKP3-201ENST00000417799 865 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 RPL12P43-201ENST00000420608 499 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 HNRNPA1P35-201ENST00000429216 963 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 Z83838.1-201ENST00000431036 925 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AL365220.1-201ENST00000432923 399 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 PRKAR1AP1-201ENST00000441422 1162 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 NREP-208ENST00000453526 559 ntAPPRIS P1 TSL 4 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC084754.1-201ENST00000463466 464 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AL079303.1-201ENST00000486611 463 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 CCDC58-206ENST00000497726 438 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC084024.2-201ENST00000503480 791 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 FAM92A1P2-202ENST00000504766 877 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 IMPA1P1-201ENST00000510718 842 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 SNORA70.17-201ENST00000516449 133 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC025881.1-201ENST00000518851 512 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 OR7E154P-201ENST00000525174 932 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC068768.1-202ENST00000541002 1110 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC003002.1-201ENST00000543226 732 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 FAM192A-220ENST00000569266 981 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 DYM-207ENST00000578396 755 ntTSL 3 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 DUXAP4-201ENST00000603046 613 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 MIR4435-2HG-217ENST00000604981 759 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AL499627.2-201ENST00000606283 725 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AC018648.1-201ENST00000608314 668 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 SAMMSON-209ENST00000641222 1100 ntBASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 MRPL45-204ENST00000619548 1554 ntTSL 3 BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-3Q9BYR6 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.71
KRTAP3-3Q9BYR6 AC093225.1-201ENST00000506867 1408 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 P2RY10-201ENST00000171757 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms