Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 TREML5P-201ENST00000421694 576 ntBASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 FAM8A3P-201ENST00000427218 844 ntBASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 GATB-205ENST00000508611 605 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 AC093214.1-201ENST00000511688 1107 ntBASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 AC005412.3-201ENST00000580309 715 ntBASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 MIR4453-201ENST00000584019 89 ntBASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 AC078925.2-201ENST00000624013 1973 ntBASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 AC105020.1-201ENST00000435356 2205 ntBASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 SLC9A3P2-201ENST00000447821 2021 ntBASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP4-3Q9BYR4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 LINC00895-201ENST00000629028 1637 ntBASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms