Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
LITAFQ99732 AC006058.3-201ENST00000606217 1069 ntBASIC11.15□□□□□ -0.62
LITAFQ99732 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.15□□□□□ -0.62
LITAFQ99732 AC073912.3-201ENST00000624414 853 ntBASIC11.15□□□□□ -0.62
LITAFQ99732 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LITAFQ99732 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LITAFQ99732 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 KRT8P49-201ENST00000604166 1432 ntBASIC11.15□□□□□ -0.62
LITAFQ99732 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 SNX33P1-201ENST00000592116 1762 ntBASIC11.15□□□□□ -0.62
LITAFQ99732 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LITAFQ99732 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
LITAFQ99732 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
LITAFQ99732 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LITAFQ99732 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LITAFQ99732 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.15□□□□□ -0.63
LITAFQ99732 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
LITAFQ99732 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LITAFQ99732 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
LITAFQ99732 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LITAFQ99732 CICP23-201ENST00000605013 2741 ntBASIC11.15□□□□□ -0.63
LITAFQ99732 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.14□□□□□ -0.63
LITAFQ99732 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.14□□□□□ -0.63
LITAFQ99732 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.14□□□□□ -0.63
LITAFQ99732 LINC00528-201ENST00000600723 2160 ntBASIC11.14□□□□□ -0.63
LITAFQ99732 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.14□□□□□ -0.63
LITAFQ99732 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.14□□□□□ -0.63
LITAFQ99732 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
LITAFQ99732 AL353593.2-201ENST00000602529 1483 ntBASIC11.14□□□□□ -0.63
LITAFQ99732 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LITAFQ99732 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.14□□□□□ -0.63
LITAFQ99732 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 AL031731.1-201ENST00000642131 2094 ntBASIC11.14□□□□□ -0.63
LITAFQ99732 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.14□□□□□ -0.63
LITAFQ99732 AC103564.2-201ENST00000432853 1299 ntBASIC11.14□□□□□ -0.63
LITAFQ99732 GLI3-203ENST00000437480 451 ntTSL 2 BASIC11.14□□□□□ -0.63
LITAFQ99732 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC11.14□□□□□ -0.63
LITAFQ99732 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.14□□□□□ -0.63
LITAFQ99732 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC11.14□□□□□ -0.63
LITAFQ99732 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 AC092666.2-201ENST00000613287 246 ntBASIC11.14□□□□□ -0.63
LITAFQ99732 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 AC079602.3-201ENST00000623931 403 ntBASIC11.14□□□□□ -0.63
LITAFQ99732 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.14□□□□□ -0.63
LITAFQ99732 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.14□□□□□ -0.63
LITAFQ99732 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC11.14□□□□□ -0.63
LITAFQ99732 AL512652.2-201ENST00000625156 1716 ntBASIC11.14□□□□□ -0.63
LITAFQ99732 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
LITAFQ99732 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.14□□□□□ -0.63
LITAFQ99732 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
LITAFQ99732 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LITAFQ99732 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LITAFQ99732 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.13□□□□□ -0.63
LITAFQ99732 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
LITAFQ99732 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.13□□□□□ -0.63
LITAFQ99732 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LITAFQ99732 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms