Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RAB40CQ96S21 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40CQ96S21 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 MIR600HG-201ENST00000449175 5984 ntBASIC13.63□□□□□ -0.23
RAB40CQ96S21 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 AC092597.1-201ENST00000487352 616 ntBASIC13.63□□□□□ -0.23
RAB40CQ96S21 YBX1P2-201ENST00000489612 999 ntBASIC13.63□□□□□ -0.23
RAB40CQ96S21 GUSBP12-201ENST00000513727 720 ntBASIC13.63□□□□□ -0.23
RAB40CQ96S21 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 AL441883.1-201ENST00000566170 1045 ntBASIC13.63□□□□□ -0.23
RAB40CQ96S21 AL138831.2-201ENST00000606564 490 ntBASIC13.63□□□□□ -0.23
RAB40CQ96S21 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
RAB40CQ96S21 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RAB40CQ96S21 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 DUX4L17-201ENST00000557360 1267 ntBASIC13.62□□□□□ -0.23
RAB40CQ96S21 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.62□□□□□ -0.23
RAB40CQ96S21 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RAB40CQ96S21 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB40CQ96S21 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms