Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 SPDYE7P-202ENST00000420373 878 ntBASIC19.56■□□□□ 0.72
TRIM47Q96LD4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.56■□□□□ 0.72
TRIM47Q96LD4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 SERBP1P5-201ENST00000510079 1181 ntBASIC19.56■□□□□ 0.72
TRIM47Q96LD4 IGHV3-62-201ENST00000520057 340 ntBASIC19.56■□□□□ 0.72
TRIM47Q96LD4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 AC025048.6-201ENST00000634326 1161 ntBASIC19.56■□□□□ 0.72
TRIM47Q96LD4 AC084121.4-201ENST00000641598 221 ntBASIC19.56■□□□□ 0.72
TRIM47Q96LD4 AF228730.8-201ENST00000642140 221 ntBASIC19.56■□□□□ 0.72
TRIM47Q96LD4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM47Q96LD4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 PCDHA12-202ENST00000613593 2588 ntBASIC19.55■□□□□ 0.72
TRIM47Q96LD4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 AC069120.2-201ENST00000524091 540 ntBASIC19.55■□□□□ 0.72
TRIM47Q96LD4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 MIR4515-201ENST00000584082 81 ntBASIC19.55■□□□□ 0.72
TRIM47Q96LD4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 OR6D1P-203ENST00000641209 4860 ntBASIC19.55■□□□□ 0.72
TRIM47Q96LD4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM47Q96LD4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.54■□□□□ 0.72
TRIM47Q96LD4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 NME2P1-201ENST00000426182 414 ntBASIC19.54■□□□□ 0.72
TRIM47Q96LD4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 AC092580.3-201ENST00000430932 139 ntBASIC19.54■□□□□ 0.72
TRIM47Q96LD4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 KRT8P23-201ENST00000560090 1207 ntBASIC19.54■□□□□ 0.72
TRIM47Q96LD4 AL596325.1-201ENST00000563991 1082 ntBASIC19.54■□□□□ 0.72
TRIM47Q96LD4 SPDYE22P-201ENST00000582158 798 ntBASIC19.54■□□□□ 0.72
TRIM47Q96LD4 AL161645.1-201ENST00000622716 1255 ntBASIC19.54■□□□□ 0.72
TRIM47Q96LD4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM47Q96LD4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms