Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 KRT18P3-201ENST00000451602 1288 ntBASIC14.72□□□□□ -0.05
TMEM54Q969K7 RNA5SP416-201ENST00000516838 111 ntBASIC14.72□□□□□ -0.05
TMEM54Q969K7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 AC020765.3-201ENST00000613051 740 ntBASIC14.72□□□□□ -0.05
TMEM54Q969K7 FAM197Y3-203ENST00000618346 717 ntBASIC14.72□□□□□ -0.05
TMEM54Q969K7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.71□□□□□ -0.05
TMEM54Q969K7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TMEM54Q969K7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TMEM54Q969K7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM54Q969K7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM54Q969K7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.71□□□□□ -0.06
TMEM54Q969K7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM54Q969K7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TMEM54Q969K7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 PCGF3-213ENST00000620529 1899 ntBASIC14.7□□□□□ -0.06
TMEM54Q969K7 LINC01144-201ENST00000626198 1710 ntBASIC14.7□□□□□ -0.06
TMEM54Q969K7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 AC140658.5-201ENST00000438532 169 ntBASIC14.7□□□□□ -0.06
TMEM54Q969K7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 AC109635.5-201ENST00000533593 962 ntBASIC14.7□□□□□ -0.06
TMEM54Q969K7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 AL009183.1-201ENST00000603760 355 ntBASIC14.7□□□□□ -0.06
TMEM54Q969K7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 OR6D1P-203ENST00000641209 4860 ntBASIC14.7□□□□□ -0.06
TMEM54Q969K7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
TMEM54Q969K7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM54Q969K7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms